RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 CYP2J2P51589 502 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 KRT85P78386 507 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 TANGO2Q6ICL3 276 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 MTSS1LQ765P7 747 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 ALYREFQ86V81 257 aaKnown RBP17.37■□□□□ 0.37
NR1H3-227ENST00000498548 THEM5Q8N1Q8 247 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 ZNF560Q96MR9 790 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 AGPAT3Q9NRZ7 376 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 FAM86C1Q9NVL1 165 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 SIX4Q9UIU6 781 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 DSEQ9UL01 958 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 MAFFQ9ULX9 164 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 PTPRJQ12913 1337 aa17.37■□□□□ 0.37
NR1H3-227ENST00000498548 WDFY4Q6ZS81 3184 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 PVALEFA0A1B0GWK0 134 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 H0Y858 1186 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 ZNF197O14709 1029 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 TMEM191BP0C7N4 346 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 CMA1P23946 247 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 CLCN5P51795 746 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 EPHB3P54753 998 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 PTPN5P54829 565 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 TEAD2Q15562 447 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 GPIHBP1Q8IV16 184 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 GDPD2Q9HCC8 539 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 ASAH2Q9NR71 780 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 INTS13Q9NVM9 706 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 MUC6Q6W4X9 2439 aa17.36■□□□□ 0.37
NR1H3-227ENST00000498548 KIAA0391O15091 583 aaKnown RBP17.35■□□□□ 0.37
NR1H3-227ENST00000498548 HCRTO43612 131 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 RFX1P22670 979 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 RBP5P82980 135 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 SNW1Q13573 536 aaKnown RBP17.35■□□□□ 0.37
NR1H3-227ENST00000498548 MGAT5BQ3V5L5 792 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 FAM78AQ5JUQ0 283 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 TMC8Q8IU68 726 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 PDCL2Q8N4E4 241 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 SEPT5Q99719 369 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-227ENST00000498548 PRRX2Q99811 253 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 LPIN3Q9BQK8 851 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 LRRC3Q9BY71 257 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 TBC1D17Q9HA65 648 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 ZNF334Q9HCZ1 680 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-227ENST00000498548 SLC2A4RGQ9NR83 387 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 TMLHEQ9NVH6 421 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 GDE1Q9NZC3 331 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 ITGA11Q9UKX5 1188 aa17.35■□□□□ 0.37
NR1H3-227ENST00000498548 A0A1W2PRU2 124 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 GALR2O43603 387 aaPredicted RBP17.34■□□□□ 0.37
NR1H3-227ENST00000498548 TNNC2P02585 160 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 AOC1P19801 751 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 ACAT1P24752 427 aaKnown RBP17.34■□□□□ 0.37
NR1H3-227ENST00000498548 PNPLA4P41247 253 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 NDUFA8P51970 172 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 STK4Q13043 487 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 GRM2Q14416 872 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 DNAJB7Q7Z6W7 309 aaPredicted RBP17.34■□□□□ 0.37
NR1H3-227ENST00000498548 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 SHKBP1Q8TBC3 707 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 FAM200AQ8TCP9 573 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 GIPC2Q8TF65 315 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 ARHGEF3Q9NR81 526 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 ABI2Q9NYB9 513 aaPredicted RBP17.34■□□□□ 0.37
NR1H3-227ENST00000498548 HPSEQ9Y251 543 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 SNX9Q9Y5X1 595 aa17.34■□□□□ 0.37
NR1H3-227ENST00000498548 UBE4BO95155 1302 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 HUS1O60921 280 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 ECI2O75521 394 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 FCARP24071 287 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 VIPR2P41587 438 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 SYKP43405 635 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 EPHA5P54756 1037 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 PLD1Q13393 1074 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 SURF1Q15526 300 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 DUOXA2Q1HG44 320 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 SLC44A4Q53GD3 710 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 LRRC52Q8N7C0 313 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 KIAA0895Q8NCT3 520 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 ATOH1Q92858 354 aaPredicted RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 KIAA1586Q9HCI6 787 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 ZFP14Q9HCL3 533 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 EXOC1Q9NV70 894 aa17.33■□□□□ 0.36
NR1H3-227ENST00000498548 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
NR1H3-227ENST00000498548 LRRN2O75325 713 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms