RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, human

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-213	ENST00000498524	CCHCR1	Q8TD31	782 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF473	Q8WTR7	871 aa	Known RBP	4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MRPS31	Q92665	395 aa	Known RBP	4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.17	□□□□□ -1.74	3e-9	■■□□□ 13
ANKRD28-213	ENST00000498524	DYNLL2	Q96FJ2	89 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SCLY	Q96I15	445 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GAD1	Q99259	594 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NT5C3A	Q9H0P0	336 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TMEM161A	Q9NX61	479 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PKD2L1	Q9P0L9	805 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GTF2IRD1	Q9UHL9	959 aa		4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.17	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BCOR	Q6W2J9	1755 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KDM3A	Q9Y4C1	1321 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PHF20L1	A8MW92	1017 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524		H0Y626	953 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF263	O14978	683 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LUC7L3	O95232	432 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TRIM16	O95361	564 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FTCD	O95954	541 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM107A	O95990	144 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SYP	P08247	313 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	H2AFZ	P0C0S5	128 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EPB41	P11171	864 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SHMT1	P34896	483 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CDK17	Q00537	523 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PLIN5	Q00G26	463 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GUCY1A3	Q02108	690 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MXD4	Q14582	209 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SGO2	Q562F6	1265 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FIGN	Q5HY92	759 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SWT1	Q5T5J6	900 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SEL1L2	Q5TEA6	688 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	H2AFV	Q71UI9	128 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	INTS8	Q75QN2	995 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DCP1B	Q8IZD4	617 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	C3orf20	Q8ND61	904 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NETO1	Q8TDF5	533 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LARP4B	Q92615	738 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EDA	Q92838	391 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TCF25	Q9BQ70	676 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NUSAP1	Q9BXS6	441 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CCSER1	Q9C0I3	900 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HAUS2	Q9NVX0	235 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	AMFR	Q9UKV5	643 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	APOBEC2	Q9Y235	224 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SSU72P8	A0A1W2PR75	194 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM205C	A6NFA0	338 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LRRC53	A6NM62	1247 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524		H3BNC9	293 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	INO80B-WBP1	J3KQ70	363 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SYF2	O95926	243 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KRT14	P02533	472 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GCK	P35557	465 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PBX1	P40424	430 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GLUD2	P49448	558 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF543	Q08ER8	600 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GRIK4	Q16099	956 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TCEAL5	Q5H9L2	206 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM26F	Q5R3K3	315 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NAA35	Q5VZE5	725 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ASTL	Q6HA08	431 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NOTUM	Q6P988	496 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LRIG3	Q6UXM1	1119 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	UBL4B	Q8N7F7	174 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KLHL23	Q8NBE8	558 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SPATA20	Q8TB22	786 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CAVIN3	Q969G5	261 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	UROC1	Q96N76	676 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZIM3	Q96PE6	472 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ERGIC2	Q96RQ1	377 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CCT8L2	Q96SF2	557 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF577	Q9BSK1	485 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CELF4	Q9BZC1	486 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TRIM31	Q9BZY9	425 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ELAC1	Q9H777	363 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PTPRH	Q9HD43	1115 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	AGPAT5	Q9NUQ2	364 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CYP39A1	Q9NYL5	469 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NKIRAS1	Q9NYS0	192 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CEP72	Q9P209	647 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	UXT	Q9UBK9	157 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LSM7	Q9UK45	103 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NOVA2	Q9UNW9	492 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ROBO3	Q96MS0	1386 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KDM3B	Q7LBC6	1761 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524		A0A1W2PRG0	241 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SMCO2	A6NFE2	343 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524		H3BQ06	376 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RRP8	O43159	456 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CALU	O43852	315 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NDUFS2	O75306	463 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PALM	O75781	387 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CLTA	P09496	248 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms