RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PSMC2P35998 433 aaKnown RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 LHX1P48742 406 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 NTHL1P78549 312 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 MYL7Q01449 175 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 TWF1Q12792 350 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 BIRC3Q13489 604 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 STIM1Q13586 685 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 IQCEQ6IPM2 695 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 CENPPQ6IPU0 288 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 GET4Q7L5D6 327 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 PDCL2Q8N4E4 241 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 ATAD1Q8NBU5 361 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 TSG101Q99816 390 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 RTP3Q9BQQ7 232 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 HCFC1R1Q9NWW0 138 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 DDX43Q9NXZ2 648 aaKnown RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 L1RE1Q9UN81 338 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 SLC27A5Q9Y2P5 690 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 IKBKBO14920 756 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 AKAP3O75969 853 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 CLSTN1O94985 981 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 ATICP31939 592 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 ALDH1A3P47895 512 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 TUFMP49411 452 aaKnown RBP13.74□□□□□ -0.21
HSPG2-213ENST00000498495 VAMP7P51809 220 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 DLG4P78352 724 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 CLDN10P78369 228 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 TSPY1Q01534 308 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 SMARCB1Q12824 385 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 PLD1Q13393 1074 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 SOWAHAQ2M3V2 549 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 WDR72Q3MJ13 1102 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 PABPC1LQ4VXU2 614 aaKnown RBP13.74□□□□□ -0.21
HSPG2-213ENST00000498495 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
HSPG2-213ENST00000498495 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 FAM186BQ8IYM0 893 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 ADGRF2Q8IZF7 708 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 SPATA18Q8TC71 538 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 C2orf15Q8WU43 125 aaKnown RBP13.74□□□□□ -0.21
HSPG2-213ENST00000498495 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-213ENST00000498495 MYADMQ96S97 322 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 ACBD6Q9BR61 282 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 CORO1BQ9BR76 489 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 HSFX1Q9UBD0 423 aa13.74□□□□□ -0.21
HSPG2-213ENST00000498495 N4BP1O75113 896 aaKnown RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 RHOP08100 348 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 LAMP2P13473 410 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 PPP1R2P41236 205 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 EPHB3P54753 998 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 MYL6P60660 151 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 TNNC1P63316 161 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 CAMK4Q16566 473 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 NFE2Q16621 373 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 CYP4A22Q5TCH4 519 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 TDRD10Q5VZ19 366 aaKnown RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 ANKRD40Q6AI12 368 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 ADSSL1Q8N142 457 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 EDAQ92838 391 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 DHTKD1Q96HY7 919 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 SORCS3Q9UPU3 1222 aa13.73□□□□□ -0.21
HSPG2-213ENST00000498495 MRPS23Q9Y3D9 190 aaKnown RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 ZFP37Q9Y6Q3 630 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-213ENST00000498495 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 BIN1O00499 593 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 ZNF197O14709 1029 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 GABRDO14764 452 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 PSMA7O14818 248 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 VNN2O95498 520 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 ASGR2P07307 311 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 FAM163BP0C2L3 166 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 EPB41P11171 864 aaKnown RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 ACAT1P24752 427 aaKnown RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 CCNE1P24864 410 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 PCSK1P29120 753 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 GNL1P36915 607 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 CDR1P51861 262 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 ZXDAP98168 799 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 NCOA4Q13772 614 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 TMEM31Q5JXX7 168 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms