RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 XPOTO43592 962 aaKnown RBP18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 MGEA5O60502 916 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 CD4P01730 458 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 PAFAH1B1P43034 410 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 DENND1BQ6P3S1 775 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 PHF13Q86YI8 300 aaPredicted RBP18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 CALR3Q96L12 384 aaKnown RBP18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 AVENQ9NQS1 362 aaPredicted RBP18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 ANAPC7Q9UJX3 599 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 BARX2Q9UMQ3 279 aaPredicted RBP18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 PCDHGC3Q9UN70 934 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 CEP83Q9Y592 693 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 ALG6Q9Y672 507 aa18.93■□□□□ 0.62
CHRNA4-206ENST00000498043 RHOXF2BP0C7M4 288 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 ITGA4P13612 1032 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 RNASE9P60153 205 aaKnown RBP18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 CFAP221Q4G0U5 840 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 DPH6Q7L8W6 267 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 TMEM35BQ8NCS4 154 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 RPGRIP1Q96KN7 1286 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 RHOXF2Q9BQY4 288 aa18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 MRPL45Q9BRJ2 306 aaKnown RBP18.92■□□□□ 0.62
CHRNA4-206ENST00000498043 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 MED7O43513 233 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 ATF7P17544 494 aaPredicted RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 C1QBPQ07021 282 aaKnown RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 PTP4A2Q12974 167 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 LIN9Q5TKA1 542 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 FBXO38Q6PIJ6 1188 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 ZNF572Q7Z3I7 529 aaPredicted RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 CPNE8Q86YQ8 564 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 HACE1Q8IYU2 909 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 GPR161Q8N6U8 529 aaKnown RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 ZNF560Q96MR9 790 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 TRIM7Q9C029 511 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 A0A0U1RQG5 324 aaPredicted RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 PIRO00625 290 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 CKBP12277 381 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 COMTP21964 271 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 MMP8P22894 467 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 AFF1P51825 1210 aaKnown RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 PPP1R2P3Q6NXS1 205 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 RNF169Q8NCN4 708 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 SPATA4Q8NEY3 305 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 PPP1R10Q96QC0 940 aaKnown RBP18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 GAD1Q99259 594 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 ANKZF1Q9H8Y5 726 aa18.91■□□□□ 0.62
CHRNA4-206ENST00000498043 SPTLC1O15269 473 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 DDX3YO15523 660 aaKnown RBP18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 CEP104O60308 925 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 FAM26DQ5JW98 314 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 SMYD5Q6GMV2 418 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 WDTC1Q8N5D0 677 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 VCPIP1Q96JH7 1222 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 TSPAN18Q96SJ8 248 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 NT5C1AQ9BXI3 368 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 CACNG4Q9UBN1 327 aa18.9■□□□□ 0.62
CHRNA4-206ENST00000498043 CES2O00748 559 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 SPOPO43791 374 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 GJB6O95452 261 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 CDH5P33151 784 aaPredicted RBP18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 MARCKSL1P49006 195 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 SLC43A3Q8NBI5 491 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 PBKQ96KB5 322 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 PHF24Q9UPV7 400 aa18.89■□□□□ 0.62
CHRNA4-206ENST00000498043 KPNA7A9QM74 516 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 M0QYV0 167 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 CYP3A5P20815 502 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 PNPLA4P41247 253 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 TAF6P49848 677 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 SOWAHAQ2M3V2 549 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 DCAF12L1Q5VU92 463 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 AGMOQ6ZNB7 445 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 TTC39CQ8N584 583 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 GSTCDQ8NEC7 633 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 KRT35Q92764 455 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 ADAM2Q99965 735 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 ZNF518BQ9C0D4 1074 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 RBM12Q9NTZ6 932 aaKnown RBP18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 RNF14Q9UBS8 474 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 CYTH4Q9UIA0 394 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
CHRNA4-206ENST00000498043 ARL5CA6NH57 179 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 MICAL2O94851 1124 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 CALB1P05937 261 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 VDRP11473 427 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 MAMLD1Q13495 774 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 DSC3Q14574 896 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 CYP4A22Q5TCH4 519 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 ALG3Q92685 438 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 SELENOOQ9BVL4 669 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 PARD6BQ9BYG5 372 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms