RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MTO1Q9Y2Z2 717 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 HEMK1Q9Y5R4 338 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 C15orf38-AP3S2A0A0A6YYH1 394 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 TISP43B9A030 160 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 FSCN2O14926 492 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 LPXNO60711 386 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 KRT5P13647 590 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 TFDP1Q14186 410 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 C1orf228Q6PIY5 440 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 KCTD1Q719H9 257 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ARPINQ7Z6K5 226 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 PACSIN3Q9UKS6 424 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 KRT10P13645 584 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 RXRBP28702 533 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ARSEP51690 589 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 CD101Q93033 1021 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF180Q9UJW8 692 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF804BA4D1E1 1349 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ADCY3O60266 1144 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 IRX4P78413 519 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 CETN1Q12798 172 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 TMPRSS6Q8IU80 811 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 DGCR14Q96DF8 476 aaKnown RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 DOLKQ9UPQ8 538 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 GTPBP10A4D1E9 387 aaKnown RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 CRABP2P29373 138 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 KIF22Q14807 665 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 DHDDSQ86SQ9 333 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 C10orf88Q9H8K7 445 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
GAPVD1-220ENST00000497580 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 TYROBPO43914 113 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 NTSR2O95665 410 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 MT-ND3P03897 115 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 UQCRBP14927 111 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 MAN1A1P33908 653 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PDE1CQ14123 709 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 UBAP2LQ14157 1087 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 NADK2Q4G0N4 442 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 FAM178BQ8IXR5 827 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 MECRQ9BV79 373 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 LIN28AQ9H9Z2 209 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 SMIM31A0A1B0GVY4 71 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PIK3CDO00329 1044 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 HOXA7P31268 230 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 CHN2P52757 468 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 BBOF1Q8ND07 529 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ACSF2Q96CM8 615 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 SENP1Q9P0U3 644 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 SH3GLB1Q9Y371 365 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 IKBKGQ9Y6K9 419 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 USP17L10C9JJH3 530 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 E5RJQ4 531 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 CAMTA2O94983 1202 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ACTR3P61158 418 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PLOD1Q02809 727 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 DCTN2Q13561 401 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 ICA1LQ8NDH6 482 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 SETDB2Q96T68 719 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms