RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 EFCAB13Q8IY85 973 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 MCOLN2Q8IZK6 566 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 IPO4Q8TEX9 1081 aaKnown RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 TRAPPC12Q8WVT3 735 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 IFT81Q8WYA0 676 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ZNF516Q92618 1163 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 RBM41Q96IZ5 413 aaKnown RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 MS4A14Q96JA4 679 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ACAP3Q96P50 834 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 TSPAN18Q96SJ8 248 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 APBA2Q99767 749 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 FDXACB1Q9BRP7 624 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 TRIM6Q9C030 488 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 CDT1Q9H211 546 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 CYP3A43Q9HB55 503 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 SPC25Q9HBM1 224 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 EPB41L5Q9HCM4 733 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 PARVAQ9NVD7 372 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 FAM53CQ9NYF3 392 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 TAS2R14Q9NYV8 317 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ADAM22Q9P0K1 906 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 WDR35Q9P2L0 1181 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 MTRF1LQ9UGC7 380 aaKnown RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 IP6K2Q9UHH9 426 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 FEZ2Q9UHY8 353 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 CNTN6Q9UQ52 1028 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 DERAQ9Y315 318 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 Q9Y3F1 56 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 MROH7Q68CQ1 1323 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 MYO16Q9Y6X6 1858 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SMIM35A0A1B0GVV1 85 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 A6NNZ2 444 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 DDX3YO15523 660 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 RAD51CO43502 376 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 KPNA6O60684 536 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SNAI1O95863 264 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 PAEPP09466 180 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 STAG3L1P0CL83 205 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 CXCL8P10145 99 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 UNGP13051 313 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 CD19P15391 556 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 CD58P19256 250 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 TNFSF9P41273 254 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SSR1P43307 286 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 PLA2G4AP47712 749 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 RNASE9P60153 205 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 OSTNP61366 133 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 NOMO3P69849 1222 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 DR1Q01658 176 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 DRP2Q13474 957 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 TUBB8Q3ZCM7 444 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 OLFML2BQ68BL8 750 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 DESI1Q6ICB0 168 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SPOPLQ6IQ16 392 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 DNAJC24Q6P3W2 148 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 NOTUMQ6P988 496 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 DCUN1D2Q6PH85 259 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 ZNF771Q7L3S4 317 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 CROCCP2Q86T23 111 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 RSPH3Q86UC2 560 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PHF13Q86YI8 300 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 RASAL3Q86YV0 1011 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 CCDC50Q8IVM0 306 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 RHOT1Q8IXI2 618 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 HACE1Q8IYU2 909 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 BEST2Q8NFU1 509 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 OR5B17Q8NGF7 314 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 AENQ8WTP8 325 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 DDX1Q92499 740 aaKnown RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 ZNF775Q96BV0 537 aaPredicted RBP7.35□□□□□ -1.23
USP39-219ENST00000496047 ZNF560Q96MR9 790 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 C11orf70Q9BRQ4 267 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 C16orf70Q9BSU1 422 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 HAPLN2Q9GZV7 340 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 RNPEPQ9H4A4 650 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SYNCQ9H7C4 482 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PLEKHA5Q9HAU0 1116 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 GDF3Q9NR23 364 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 CISHQ9NSE2 258 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 EHD2Q9NZN4 543 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 TMEM59LQ9UK28 342 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 HPCAL4Q9UM19 191 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 C2CD2Q9Y426 696 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PCDHA3Q9Y5H8 950 aa7.35□□□□□ -1.23
USP39-219ENST00000496047 PTPRJQ12913 1337 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 TNPO2O14787 897 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 POLR3GO15318 223 aaPredicted RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 SASH3O75995 380 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 GAS8O95995 478 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 VTNP04004 478 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms