RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 SLC7A14Q8TBB6 771 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 ZDHHC16Q969W1 377 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 CCDC127Q96BQ5 260 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 PIDD1Q9HB75 910 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 AFF4Q9UHB7 1163 aaKnown RBP13.32□□□□□ -0.28
MRPL55-233ENST00000495899 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 MAPK8IP1Q9UQF2 711 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 FRMD4BQ9Y2L6 1034 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 TCHHQ07283 1943 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 PRRG1O14668 218 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 IKBKBO14920 756 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 KRT19P08727 400 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 DLATP10515 647 aaKnown RBP13.31□□□□□ -0.28
MRPL55-233ENST00000495899 CPB1P15086 417 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 ARPP19P56211 112 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 ENPEPQ07075 957 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 RNF135Q8IUD6 432 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 ZDHHC14Q8IZN3 488 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 TMEM86AQ8N2M4 240 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 PARD3BQ8TEW8 1205 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 ACSF2Q96CM8 615 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-233ENST00000495899 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
MRPL55-233ENST00000495899 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
MRPL55-233ENST00000495899 HUS1O60921 280 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 FAM163BP0C2L3 166 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 PPP1R2P41236 205 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 ZCWPW2Q504Y3 356 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 LMBRD2Q68DH5 695 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-233ENST00000495899 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 TOP6BLQ8N6T0 577 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 TDRD5Q8NAT2 981 aaKnown RBP13.3□□□□□ -0.28
MRPL55-233ENST00000495899 ZNF516Q92618 1163 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-233ENST00000495899 CYP4F11Q9HBI6 524 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.3□□□□□ -0.28
MRPL55-233ENST00000495899 CLUHO75153 1309 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 C5orf42Q9H799 3197 aa13.3□□□□□ -0.28
MRPL55-233ENST00000495899 TCF20Q9UGU0 1960 aaKnown RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 C2CD4DB7Z1M9 353 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 DCXO43602 365 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 SEC24AO95486 1093 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 STAU1O95793 577 aaKnown RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 LRG1P02750 347 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 NR2F2P24468 414 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ATICP31939 592 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 PRCPP42785 496 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 BFSP1Q12934 665 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ADAM9Q13443 819 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 CEP135Q66GS9 1140 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 CENPPQ6IPU0 288 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 INTS8Q75QN2 995 aaKnown RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 LIMS2Q7Z4I7 341 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 C1QTNF1Q9BXJ1 281 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ZCWPW1Q9H0M4 648 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
MRPL55-233ENST00000495899 ZFP37Q9Y6Q3 630 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-233ENST00000495899 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-233ENST00000495899 GABRDO14764 452 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 CCL16O15467 120 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PHACTR2O75167 634 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 AKAP3O75969 853 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PTPN2P17706 415 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
MRPL55-233ENST00000495899 LHX1P48742 406 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 CASP4P49662 377 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PLD1Q13393 1074 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 TRPC3Q13507 836 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 STIM1Q13586 685 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 SOWAHAQ2M3V2 549 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 GRASPQ7Z6J2 395 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-233ENST00000495899 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-233ENST00000495899 DCP1BQ8IZD4 617 aaKnown RBP13.28□□□□□ -0.28
MRPL55-233ENST00000495899 ADSSL1Q8N142 457 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 OR10T2Q8NGX3 314 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 PLEKHO2Q8TD55 490 aa13.28□□□□□ -0.28
MRPL55-233ENST00000495899 SYAP1Q96A49 352 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms