RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	KCTD10	Q9H3F6	313 aa		11.8	□□□□□ -0.52
DCTN1-223	ENST00000495643	GDAP2	Q9NXN4	497 aa		11.8	□□□□□ -0.52
DCTN1-223	ENST00000495643	HSFX1	Q9UBD0	423 aa		11.8	□□□□□ -0.52
DCTN1-223	ENST00000495643	MRPS23	Q9Y3D9	190 aa	Known RBP	11.8	□□□□□ -0.52
DCTN1-223	ENST00000495643	MUC6	Q6W4X9	2439 aa		11.8	□□□□□ -0.52
DCTN1-223	ENST00000495643	NRG2	O14511	850 aa	Predicted RBP	11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	MICAL2	O94851	1124 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	RHOBTB3	O94955	611 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	ZNF202	O95125	648 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	TMEM191B	P0C7N4	346 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	CEBPB	P17676	345 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	CCR2	P41597	374 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	EPHA5	P54756	1037 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	PSMD6	Q15008	389 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	DUOXA2	Q1HG44	320 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	SLC39A12	Q504Y0	691 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	PARM1	Q6UWI2	310 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	LIMS2	Q7Z4I7	341 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	LRRTM3	Q86VH5	581 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	HS6ST3	Q8IZP7	471 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	THEM5	Q8N1Q8	247 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	ELMOD1	Q8N336	334 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	PDCL2	Q8N4E4	241 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	TTC9B	Q8N6N2	239 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	GOLGA5	Q8TBA6	731 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	ING5	Q8WYH8	240 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	TCEAL4	Q96EI5	215 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	ZNF512	Q96ME7	567 aa	Predicted RBP	11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	RPP25	Q9BUL9	199 aa	Known RBP	11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	LRRC3	Q9BY71	257 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	DNAJC25	Q9H1X3	360 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	DMAC2	Q9NW81	257 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	GDE1	Q9NZC3	331 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	L1RE1	Q9UN81	338 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	SLC27A5	Q9Y2P5	690 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	YIPF1	Q9Y548	306 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	NUMBL	Q9Y6R0	609 aa		11.79	□□□□□ -0.52
DCTN1-223	ENST00000495643	PDXK	O00764	312 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	ZNF197	O14709	1029 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	HUS1	O60921	280 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	PRPF40A	O75400	957 aa	Known RBP	11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	MOSPD3	O75425	235 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	TNNC2	P02585	160 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	KRT19	P08727	400 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	SRF	P11831	508 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	BFSP1	Q12934	665 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	PLD1	Q13393	1074 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	IQCE	Q6IPM2	695 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	MTSS1L	Q765P7	747 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	TRAPPC11	Q7Z392	1133 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	SLC9A9	Q8IVB4	645 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	SUGP1	Q8IWZ8	645 aa	Known RBP	11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	TMEM86A	Q8N2M4	240 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	PLEKHO2	Q8TD55	490 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	ZNF516	Q92618	1163 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	MCRS1	Q96EZ8	462 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	CGRRF1	Q99675	332 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	KCNH6	Q9H252	994 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	WNT16	Q9UBV4	365 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	SNX9	Q9Y5X1	595 aa		11.78	□□□□□ -0.52
DCTN1-223	ENST00000495643	GABRD	O14764	452 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	EXOC3	O60645	756 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SOAT2	O75908	522 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	CST3	P01034	146 aa	Predicted RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	DLAT	P10515	647 aa	Known RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	NPR3	P17342	541 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	TNNI1	P19237	187 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	AVPR2	P30518	371 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	ALDH1A3	P47895	512 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	CDR1	P51861	262 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	EPHB3	P54753	998 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	VCP	P55072	806 aa	Known RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	CLDN10	P78369	228 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SMARCB1	Q12824	385 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	MYO1E	Q12965	1108 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SNW1	Q13573	536 aa	Known RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	KCNB1	Q14721	858 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SOWAHA	Q2M3V2	549 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	IER5L	Q5T953	404 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	CYP4A22	Q5TCH4	519 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	PDZD4	Q76G19	769 aa	Predicted RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	DPH6	Q7L8W6	267 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	OSTM1	Q86WC4	334 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	TMC8	Q8IU68	726 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	DCP1B	Q8IZD4	617 aa	Known RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	TOP6BL	Q8N6T0	577 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	LEMD2	Q8NC56	503 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	ENGASE	Q8NFI3	743 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SPATA18	Q8TC71	538 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	C2orf15	Q8WU43	125 aa	Known RBP	11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	CCDC127	Q96BQ5	260 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	HPDL	Q96IR7	371 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	FNBP1	Q96RU3	617 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	PKMYT1	Q99640	499 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	ACBD6	Q9BR61	282 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	ASAH2	Q9NR71	780 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	SLC2A4RG	Q9NR83	387 aa		11.77	□□□□□ -0.53
DCTN1-223	ENST00000495643	TMLHE	Q9NVH6	421 aa		11.77	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms