RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PPP1R13LQ8WUF5 828 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 RUBCNQ92622 972 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 KAT5Q92993 513 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 ZBTB10Q96DT7 871 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 PACSIN1Q9BY11 444 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 MIS12Q9H081 205 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 DPP3Q9NY33 737 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 PUF60Q9UHX1 559 aaKnown RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 KIAA1257Q9ULG3 409 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 NUB1Q9Y5A7 615 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 SCINQ9Y6U3 715 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 RALGAPA2Q2PPJ7 1873 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 PTPRJQ12913 1337 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 HOXA2O43364 376 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 MTA2O94776 668 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 CALB1P05937 261 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 GHRP10912 638 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 POLR2BP30876 1174 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 PNPLA4P41247 253 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 SNX16P57768 344 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 GPNMBQ14956 572 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 STILQ15468 1287 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 RAB30Q15771 203 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 PPP2R5EQ16537 467 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 WDR72Q3MJ13 1102 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 C11orf63Q6NUN7 778 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 RSRC2Q7L4I2 434 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF572Q7Z3I7 529 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 SLFN11Q7Z7L1 901 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 CDR2LQ86X02 465 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 TMEM35BQ8NCS4 154 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 DBF4BQ8NFT6 615 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 SLC20A1Q8WUM9 679 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF653Q96CK0 615 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 THAP2Q9H0W7 228 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ELAC1Q9H777 363 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 AVENQ9NQS1 362 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.92□□□□□ -0.666e-10■■■■■ 98.2
HDAC3-214ENST00000495485 CISHQ9NSE2 258 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 PADI3Q9ULW8 664 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 UBQLN1Q9UMX0 589 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 ST3GAL5Q9UNP4 418 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 PIN4Q9Y237 131 aaKnown RBP10.92□□□□□ -0.66
HDAC3-214ENST00000495485 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
HDAC3-214ENST00000495485 CHD9Q3L8U1 2897 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 FANCGO15287 622 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 KIF4AO95239 1232 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 EOMESO95936 686 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 ITGB3P05106 788 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CYP1A2P05177 515 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CHRNB2P17787 502 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SLC1A1P43005 524 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 WNT7BP56706 349 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CENPCQ03188 943 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 TAP1Q03518 808 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 TMEM62Q0P6H9 643 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 ELF2Q15723 593 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 MAP9Q49MG5 647 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 GLE1Q53GS7 698 aaKnown RBP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SPOPLQ6IQ16 392 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SLC24A5Q71RS6 500 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 C16orf59Q7L2K0 433 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 EFCAB13Q8IY85 973 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 LRRC52Q8N7C0 313 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CEP120Q8N960 986 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 HPDLQ96IR7 371 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 TLR10Q9BXR5 811 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 APOBEC3GQ9HC16 384 aaKnown RBP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 RGS18Q9NS28 235 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SLC38A7Q9NVC3 462 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 NXF1Q9UBU9 619 aaKnown RBP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 PARP2Q9UGN5 583 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 STRIP2Q9ULQ0 834 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 AGAP1Q9UPQ3 857 aa10.91□□□□□ -0.66
HDAC3-214ENST00000495485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC3-214ENST00000495485 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF623O75123 536 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 FTCDO95954 541 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-214ENST00000495485 NFICP08651 508 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 FAM163BP0C2L3 166 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 ACRP10323 421 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 UNGP13051 313 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-214ENST00000495485 ATP2A2P16615 1042 aaKnown RBP10.9□□□□□ -0.66
HDAC3-214ENST00000495485 CYP3A5P20815 502 aa10.9□□□□□ -0.66
HDAC3-214ENST00000495485 PAX3P23760 479 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms