RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HVCN1Q96D96 273 aa25.14■■□□□ 1.62
COL27A1-208ENST00000494780 RSPRY1Q96DX4 576 aa25.14■■□□□ 1.62
COL27A1-208ENST00000494780 ATXN3LQ9H3M9 355 aa25.14■■□□□ 1.62
COL27A1-208ENST00000494780 STK17AQ9UEE5 414 aa25.14■■□□□ 1.62
COL27A1-208ENST00000494780 CCDC39Q9UFE4 941 aa25.14■■□□□ 1.62
COL27A1-208ENST00000494780 TISP43B9A030 160 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 TAF6P49848 677 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 NRLP54845 237 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 STXBP5Q5T5C0 1151 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 METTL23Q86XA0 190 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 ARID3BQ8IVW6 561 aaPredicted RBP25.13■■□□□ 1.61
COL27A1-208ENST00000494780 EPSTI1Q96J88 318 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 MKNK1Q9BUB5 465 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 ZCWPW1Q9H0M4 648 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 C8orf33Q9H7E9 229 aaPredicted RBP25.13■■□□□ 1.61
COL27A1-208ENST00000494780 DPP3Q9NY33 737 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 SMG5Q9UPR3 1016 aaKnown RBP25.13■■□□□ 1.61
COL27A1-208ENST00000494780 TSC2P49815 1807 aa25.13■■□□□ 1.61
COL27A1-208ENST00000494780 VPS37CA5D8V6 355 aaPredicted RBP25.12■■□□□ 1.61
COL27A1-208ENST00000494780 CYB561D2O14569 222 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SOAT2O75908 522 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 TDGF1P13385 188 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 CCNE1P24864 410 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 GABRR2P28476 465 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 CCR3P51677 355 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SMARCB1Q12824 385 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 PUM1Q14671 1186 aaKnown RBP eCLIP25.12■■□□□ 1.61
COL27A1-208ENST00000494780 POSTNQ15063 836 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SLC39A12Q504Y0 691 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 ARHGAP15Q53QZ3 475 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 USP49Q70CQ1 688 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SFR1Q86XK3 245 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 THEM5Q8N1Q8 247 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 GPR161Q8N6U8 529 aaKnown RBP25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SECISBP2LQ93073 1101 aaKnown RBP25.12■■□□□ 1.61
COL27A1-208ENST00000494780 PYM1Q9BRP8 204 aaKnown RBP25.12■■□□□ 1.61
COL27A1-208ENST00000494780 OBP2AQ9NY56 170 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 SEL1LQ9UBV2 794 aa25.12■■□□□ 1.61
COL27A1-208ENST00000494780 ANK1P16157 1881 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 DPYSL4O14531 572 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 CHRNB1P11230 501 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 PDCP20941 246 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 WEE1P30291 646 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 CUL4AQ13619 759 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 VEPH1Q14D04 833 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 PTPAQ15257 358 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 GPR158Q5T848 1215 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 CRELD2Q6UXH1 353 aaPredicted RBP25.11■■□□□ 1.61
COL27A1-208ENST00000494780 DYMQ7RTS9 669 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 NT5DC4Q86YG4 428 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 FAM200AQ8TCP9 573 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 C2orf15Q8WU43 125 aaKnown RBP25.11■■□□□ 1.61
COL27A1-208ENST00000494780 POMGNT1Q8WZA1 660 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 SEPT5Q99719 369 aaPredicted RBP25.11■■□□□ 1.61
COL27A1-208ENST00000494780 CLIC4Q9Y696 253 aa25.11■■□□□ 1.61
COL27A1-208ENST00000494780 PPP1R37O75864 691 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 IL18RAPO95256 599 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 ADSSP30520 456 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 KPNA1P52294 538 aaPredicted RBP25.1■■□□□ 1.61
COL27A1-208ENST00000494780 MGAT5BQ3V5L5 792 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 ARHGAP29Q52LW3 1261 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 DGLUCYQ7Z3D6 616 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 LPIN3Q9BQK8 851 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 STRA6Q9BX79 667 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 FBXO2Q9UK22 296 aaPredicted RBP25.1■■□□□ 1.61
COL27A1-208ENST00000494780 EXOC7Q9UPT5 735 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 SRPRBQ9Y5M8 271 aaKnown RBP25.1■■□□□ 1.61
COL27A1-208ENST00000494780 SCN1AP35498 2009 aa25.1■■□□□ 1.61
COL27A1-208ENST00000494780 DCHS1Q96JQ0 3298 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 GAP43P17677 238 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 CDC25CP30307 473 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 LRRC32Q14392 662 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 RRAGBQ5VZM2 374 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 GPIHBP1Q8IV16 184 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 EFCAB13Q8IY85 973 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 SPPL2BQ8TCT7 592 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 IKZF4Q9H2S9 585 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 TASP1Q9H6P5 420 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 MRPL44Q9H9J2 332 aaKnown RBP25.09■■□□□ 1.61
COL27A1-208ENST00000494780 DLL3Q9NYJ7 618 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 CEP250Q9BV73 2442 aa25.09■■□□□ 1.61
COL27A1-208ENST00000494780 MYBPHLA2RUH7 354 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 KPNA7A9QM74 516 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 ATF6P18850 670 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 TXLNAP40222 546 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 CXCL12P48061 93 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 SV2CQ496J9 727 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 WSCD1Q658N2 575 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 SV2BQ7L1I2 683 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 RALGPS2Q86X27 583 aaPredicted RBP25.08■■□□□ 1.61
COL27A1-208ENST00000494780 ZNF560Q96MR9 790 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 LRRC3BQ96PB8 259 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 GCNAQ96QF7 691 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 IL21Q9HBE4 155 aa25.08■■□□□ 1.61
COL27A1-208ENST00000494780 NUP210Q8TEM1 1887 aaPredicted RBP25.08■■□□□ 1.61
COL27A1-208ENST00000494780 MYMKA6NI61 221 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 SLC38A8A6NNN8 435 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 HAPLN1P10915 354 aaPredicted RBP25.07■■□□□ 1.6
COL27A1-208ENST00000494780 PNPLA4P41247 253 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 PLCB2Q00722 1185 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms