RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ARNTLO00327 626 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 MICAL2O94851 1124 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 PRPF6O94906 941 aaKnown RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 SP9P0CG40 484 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 IDEP14735 1019 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 GAP43P17677 238 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 HOXD13P35453 343 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 PRKCQQ04759 706 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 PKP1Q13835 747 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 MYBPC2Q14324 1141 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 WSCD1Q658N2 575 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 GAREM2Q75VX8 874 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 ELMOD1Q8N336 334 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 C1orf127Q8N9H9 656 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 ZSCAN18Q8TBC5 510 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 SMARCD2Q92925 531 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 NKD2Q969F2 451 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 ZNF512Q96ME7 567 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 TSPAN18Q96SJ8 248 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-208ENST00000494728 CYB561D2O14569 222 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 ZNF197O14709 1029 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 HCRTO43612 131 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 ITGB3P05106 788 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
VTI1A-208ENST00000494728 ABCD1P33897 745 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 TXLNAP40222 546 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 TAF6P49848 677 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 PFKPQ01813 784 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-208ENST00000494728 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 LMBRD2Q68DH5 695 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-208ENST00000494728 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-208ENST00000494728 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 DNASE1L2Q92874 299 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 SHDQ96IW2 340 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 PCIF1Q9H4Z3 704 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 ZFP14Q9HCL3 533 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 PANK4Q9NVE7 773 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 TMLHEQ9NVH6 421 aa12.58□□□□□ -0.4
VTI1A-208ENST00000494728 TFIP11Q9UBB9 837 aaKnown RBP12.58□□□□□ -0.4
VTI1A-208ENST00000494728 FAM170BA6NMN3 283 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 CASP1P29466 404 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 GDI1P31150 447 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 GPR15P49685 360 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 CYP4F8P98187 520 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 STK38Q15208 465 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 DNAJB7Q7Z6W7 309 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-208ENST00000494728 OSTM1Q86WC4 334 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 PSMG2Q969U7 264 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 SEPT5Q99719 369 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-208ENST00000494728 OXCT2Q9BYC2 517 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-208ENST00000494728 MTMR12Q9C0I1 747 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-208ENST00000494728 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 BRD9Q9H8M2 597 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 PDE11AQ9HCR9 933 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-208ENST00000494728 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 EML5Q05BV3 1969 aa12.57□□□□□ -0.4
VTI1A-208ENST00000494728 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 KPNA7A9QM74 516 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 SPTLC2O15270 562 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 IL18RAPO95256 599 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 PSMC3P17980 439 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 GABRR2P28476 465 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 ALDH1A3P47895 512 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 SOX9P48436 509 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 EPHB3P54753 998 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 TFAMQ00059 246 aaKnown RBP12.56□□□□□ -0.4
VTI1A-208ENST00000494728 PLD1Q13393 1074 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 TMEM150AQ86TG1 271 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 ADSSL1Q8N142 457 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 OR5B17Q8NGF7 314 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 GIPC2Q8TF65 315 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
VTI1A-208ENST00000494728 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 DHX58Q96C10 678 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 ZFYVE19Q96K21 471 aa12.56□□□□□ -0.4
VTI1A-208ENST00000494728 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms