RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PRSS36Q5K4E3 855 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 SIX5Q8N196 739 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 LRRC52Q8N7C0 313 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 FSIP1Q8NA03 581 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 OR5B17Q8NGF7 314 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 RTP3Q9BQQ7 232 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 ZCWPW1Q9H0M4 648 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 R3HCC1Q9Y3T6 440 aaKnown RBP35.78■■■■□ 3.32
CBX4-203ENST00000494546 ZNF318Q5VUA4 2279 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 PTPRJQ12913 1337 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 ZNF197O14709 1029 aa35.77■■■■□ 3.32
CBX4-203ENST00000494546 ALDH1A3P47895 512 aa35.77■■■■□ 3.32
CBX4-203ENST00000494546 CXorf38Q8TB03 319 aa35.77■■■■□ 3.32
CBX4-203ENST00000494546 GDE1Q9NZC3 331 aa35.77■■■■□ 3.32
CBX4-203ENST00000494546 SIX4Q9UIU6 781 aa35.77■■■■□ 3.32
CBX4-203ENST00000494546 TNNC2P02585 160 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 MYL4P12829 197 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 CCR2P41597 374 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 STK4Q13043 487 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 TTC9BQ8N6N2 239 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 XXYLT1Q8NBI6 393 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 FLCNQ8NFG4 579 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 KXD1Q9BQD3 176 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 ASAH2Q9NR71 780 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 WNT16Q9UBV4 365 aa35.76■■■■□ 3.32
CBX4-203ENST00000494546 FAM237AA0A1B0GTK4 181 aa35.75■■■■□ 3.31
CBX4-203ENST00000494546 EPHB3P54753 998 aa35.75■■■■□ 3.31
CBX4-203ENST00000494546 GPR152Q8TDT2 470 aa35.75■■■■□ 3.31
CBX4-203ENST00000494546 CA14Q9ULX7 337 aa35.75■■■■□ 3.31
CBX4-203ENST00000494546 TCHHQ07283 1943 aa35.75■■■■□ 3.31
CBX4-203ENST00000494546 A0A1W2PQ27 194 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 A0A1W2PQ64 194 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 A0A1W2PQD8 194 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 HUS1O60921 280 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 SOAT2O75908 522 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 DLATP10515 647 aaKnown RBP35.74■■■■□ 3.31
CBX4-203ENST00000494546 PSMD2Q13200 908 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 DUOXA2Q1HG44 320 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 WDR49Q8IV35 697 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 PDCL2Q8N4E4 241 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 LEMD2Q8NC56 503 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 KIAA0895Q8NCT3 520 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 CGNQ9P2M7 1197 aaKnown RBP35.74■■■■□ 3.31
CBX4-203ENST00000494546 L1RE1Q9UN81 338 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 SNX9Q9Y5X1 595 aa35.74■■■■□ 3.31
CBX4-203ENST00000494546 KMT2EQ8IZD2 1858 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 ZDBF2Q9HCK1 2354 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 MYL1P05976 194 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 ASTLQ6HA08 431 aaPredicted RBP35.73■■■■□ 3.31
CBX4-203ENST00000494546 POTEHQ6S545 545 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 PRSS33Q8NF86 280 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 CCDC127Q96BQ5 260 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 FNBP1Q96RU3 617 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 SEPT5Q99719 369 aaPredicted RBP35.73■■■■□ 3.31
CBX4-203ENST00000494546 DNAJC25Q9H1X3 360 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 GOLPH3LQ9H4A5 285 aa35.73■■■■□ 3.31
CBX4-203ENST00000494546 MICAL2O94851 1124 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 RPN1P04843 607 aaKnown RBP35.72■■■■□ 3.31
CBX4-203ENST00000494546 CYP24A1Q07973 514 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 MYO1EQ12965 1108 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 LRRTM3Q86VH5 581 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 C12orf56Q8IXR9 622 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 TMEM105Q8N8V8 129 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 GDAP2Q9NXN4 497 aa35.72■■■■□ 3.31
CBX4-203ENST00000494546 NRG2O14511 850 aaPredicted RBP35.71■■■■□ 3.31
CBX4-203ENST00000494546 EXOC3O60645 756 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 PRR29P0C7W0 189 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 GJA1P17302 382 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 TNNI1P19237 187 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 EPHA5P54756 1037 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 GPC5P78333 572 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 MGAT5BQ3V5L5 792 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 CWF19L1Q69YN2 538 aaKnown RBP35.71■■■■□ 3.31
CBX4-203ENST00000494546 DCP1BQ8IZD4 617 aaKnown RBP35.71■■■■□ 3.31
CBX4-203ENST00000494546 GOLGA5Q8TBA6 731 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 PRRX2Q99811 253 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 SLC2A4RGQ9NR83 387 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 HSFX1Q9UBD0 423 aa35.71■■■■□ 3.31
CBX4-203ENST00000494546 KRBA1A5PL33 1030 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 NPR3P17342 541 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 NUCB2P80303 420 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 TSPY1Q01534 308 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 PSMD6Q15008 389 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 KRBA2Q6ZNG9 492 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 TMEM86AQ8N2M4 240 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 HPDLQ96IR7 371 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 CGRRF1Q99675 332 aa35.7■■■■□ 3.31
CBX4-203ENST00000494546 DDX43Q9NXZ2 648 aaKnown RBP35.7■■■■□ 3.31
CBX4-203ENST00000494546 ABI2Q9NYB9 513 aaPredicted RBP35.7■■■■□ 3.31
CBX4-203ENST00000494546 STK25O00506 426 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 MOSPD3O75425 235 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 RFX1P22670 979 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 TUFMP49411 452 aaKnown RBP35.69■■■■□ 3.3
CBX4-203ENST00000494546 CLCN5P51795 746 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 SMARCB1Q12824 385 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 TRAPPC11Q7Z392 1133 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 FAM200AQ8TCP9 573 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 C2orf15Q8WU43 125 aaKnown RBP35.69■■■■□ 3.3
CBX4-203ENST00000494546 ASB3Q9Y575 518 aa35.69■■■■□ 3.3
CBX4-203ENST00000494546 PRPF40AO75400 957 aaKnown RBP35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms