RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 MRPS23Q9Y3D9 190 aaKnown RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 NUMBLQ9Y6R0 609 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 WDFY4Q6ZS81 3184 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 MTMR11A4FU01 709 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 ZNF233A6NK53 670 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 CYB561D2O14569 222 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 NARSO43776 548 aaKnown RBP14.21□□□□□ -0.14
ERCC3-209ENST00000494464 KLRC4O43908 158 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 MICAL2O94851 1124 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 TMEM191BP0C7N4 346 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 EPHA5P54756 1037 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 TWF1Q12792 350 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 METTL23Q86XA0 190 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 SLC44A3Q8N4M1 653 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 FGF14Q92915 247 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 PRRX2Q99811 253 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 RTP3Q9BQQ7 232 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 MTMR12Q9C0I1 747 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 INTS13Q9NVM9 706 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 GDE1Q9NZC3 331 aa14.21□□□□□ -0.14
ERCC3-209ENST00000494464 ZDBF2Q9HCK1 2354 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 MUC6Q6W4X9 2439 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 ZNF197O14709 1029 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SYKP43405 635 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 NUBP1P53384 320 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 VCPP55072 806 aaKnown RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 PSMD2Q13200 908 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SNRNP35Q16560 246 aaKnown RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 WSCD1Q658N2 575 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 IQCEQ6IPM2 695 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 CENPPQ6IPU0 288 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SASS6Q6UVJ0 657 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 PDZD4Q76G19 769 aaPredicted RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 WDR49Q8IV35 697 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 NELFCDQ8IXH7 590 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SPATA18Q8TC71 538 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 C2orf15Q8WU43 125 aaKnown RBP14.2□□□□□ -0.14
ERCC3-209ENST00000494464 FAM122AQ96E09 287 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 ANKRD36BP1Q96IX9 119 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 PGLYRP2Q96PD5 576 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 TMEM209Q96SK2 561 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 CORO1BQ9BR76 489 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 CRISPLD1Q9H336 500 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SLC2A4RGQ9NR83 387 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 EXOC1Q9NV70 894 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 CEP72Q9P209 647 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 WNT16Q9UBV4 365 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 SIX4Q9UIU6 781 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 AGAP1Q9UPQ3 857 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 PTPRJQ12913 1337 aa14.2□□□□□ -0.14
ERCC3-209ENST00000494464 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
ERCC3-209ENST00000494464 CEBPBP17676 345 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 AVPR2P30518 371 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 RBP5P82980 135 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 DUSP4Q13115 394 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 CWF19L1Q69YN2 538 aaKnown RBP14.19□□□□□ -0.14
ERCC3-209ENST00000494464 PARM1Q6UWI2 310 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 THEM5Q8N1Q8 247 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 TMEM86AQ8N2M4 240 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 XXYLT1Q8NBI6 393 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 KIAA0895Q8NCT3 520 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 GOLGA5Q8TBA6 731 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 FAM200AQ8TCP9 573 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 ING5Q8WYH8 240 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 PDLIM2Q96JY6 352 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 ZNF512Q96ME7 567 aaPredicted RBP14.19□□□□□ -0.14
ERCC3-209ENST00000494464 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 MFSD1Q9H3U5 465 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 ASAH2Q9NR71 780 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 GDAP2Q9NXN4 497 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 FBXL21Q9UKT6 434 aa14.19□□□□□ -0.14
ERCC3-209ENST00000494464 ZNF202O95125 648 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 TNNC2P02585 160 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CCR2P41597 374 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CLCN5P51795 746 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CYP24A1Q07973 514 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 STK4Q13043 487 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 PSMD6Q15008 389 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 STX1AQ16623 288 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 DUOXA2Q1HG44 320 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 SLC39A12Q504Y0 691 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CYP4A22Q5TCH4 519 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 TMC8Q8IU68 726 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 PDCL2Q8N4E4 241 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CSGALNACT2Q8N6G5 542 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 TOP6BLQ8N6T0 577 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 ATAD1Q8NBU5 361 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 OR5B17Q8NGF7 314 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms