RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 LILRA6Q6PI73 481 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 SPATA31D4Q6ZUB0 917 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 KREMEN2Q8NCW0 462 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 TAS1R2Q8TE23 839 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 ASS1P00966 412 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 PCSK1P29120 753 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 ELF1P32519 619 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 FMO5P49326 533 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 TSPY1Q01534 308 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 TFF2Q03403 129 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 CETN1Q12798 172 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 NFKBIBQ15653 356 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 LEXMQ3ZCV2 418 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 CCDC149Q6ZUS6 474 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 ZNF461Q8TAF7 563 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 MSLNLQ96KJ4 702 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 SFXN1Q9H9B4 322 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 CDH23Q9H251 3354 aa13.37□□□□□ -0.27
TRA2A-209ENST00000494255 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
TRA2A-209ENST00000494255 SYCE3A1L190 88 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 TACC1O75410 805 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 CBWD6Q4V339 395 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 CBWD3Q5JTY5 395 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 CBWD5Q5RIA9 395 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 RARS2Q5T160 578 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 CES5AQ6NT32 575 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 LIMS2Q7Z4I7 341 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.275e-8■□□□□ 10.8
TRA2A-209ENST00000494255 RAB20Q9NX57 234 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 AFF4Q9UHB7 1163 aaKnown RBP13.36□□□□□ -0.27
TRA2A-209ENST00000494255 MAFFQ9ULX9 164 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 FAM50BQ9Y247 325 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
TRA2A-209ENST00000494255 PRRG1O14668 218 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 P4HA2O15460 535 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ABLIM3O94929 683 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
TRA2A-209ENST00000494255 OR4Q2P0C623 313 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ATF2P15336 505 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ITIH3Q06033 890 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 GPR17Q13304 367 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ANO6Q4KMQ2 910 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 OR6B3Q8NGW1 331 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 OR10T2Q8NGX3 314 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 ZCWPW1Q9H0M4 648 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
TRA2A-209ENST00000494255 GABRDO14764 452 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 PMM2O15305 246 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ZMYND10O75800 440 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 C8AP07357 584 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 MYL5Q02045 173 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ADCY1Q08828 1119 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 UVSSAQ2YD98 709 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 RNF19BQ6ZMZ0 732 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 OSTM1Q86WC4 334 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms