RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SNRPFP62306 86 aaKnown RBP15.82■□□□□ 0.12
ATG4B-224ENST00000494132 PSMD6Q15008 389 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 SURF1Q15526 300 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 CCDC142Q17RM4 750 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 DUOXA2Q1HG44 320 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 TRAPPC11Q7Z392 1133 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 LRRTM3Q86VH5 581 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 WDR49Q8IV35 697 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 C12orf56Q8IXR9 622 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 PDCL2Q8N4E4 241 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 ENGASEQ8NFI3 743 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 ZNF516Q92618 1163 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 FGF13Q92913 245 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 ELMO3Q96BJ8 720 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 TCEAL4Q96EI5 215 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 CGRRF1Q99675 332 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.82■□□□□ 0.12
ATG4B-224ENST00000494132 EPS15L1Q9UBC2 864 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 DSEQ9UL01 958 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 MRPS23Q9Y3D9 190 aaKnown RBP15.82■□□□□ 0.12
ATG4B-224ENST00000494132 HUS1O60921 280 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CST3P01034 146 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-224ENST00000494132 NR3C1P04150 777 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 GJA1P17302 382 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CEBPBP17676 345 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 PTPN2P17706 415 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 PAX3P23760 479 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CCR2P41597 374 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 COL4A3Q01955 1670 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 FAM160A1Q05DH4 1040 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 MYBPC2Q14324 1141 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 GREB1Q4ZG55 1949 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CEP135Q66GS9 1140 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 POTEHQ6S545 545 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 NPAS3Q8IXF0 933 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 THEM5Q8N1Q8 247 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 LRRC52Q8N7C0 313 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 PBXIP1Q96AQ6 731 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 MCRS1Q96EZ8 462 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 ASIC4Q96FT7 647 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 HPDLQ96IR7 371 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 MFSD14AQ96MC6 490 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 SEPT5Q99719 369 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-224ENST00000494132 RPP25Q9BUL9 199 aaKnown RBP15.81■□□□□ 0.12
ATG4B-224ENST00000494132 ZCWPW1Q9H0M4 648 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 TMLHEQ9NVH6 421 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
ATG4B-224ENST00000494132 R3HCC1Q9Y3T6 440 aaKnown RBP15.81■□□□□ 0.12
ATG4B-224ENST00000494132 NUMBLQ9Y6R0 609 aa15.81■□□□□ 0.12
ATG4B-224ENST00000494132 LRRIQ3A6PVS8 624 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-224ENST00000494132 PDXKO00764 312 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 CLSTN1O94985 981 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 POU2F2P09086 479 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 MYL4P12829 197 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 DLG4P78352 724 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 TDGQ13569 410 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 PARM1Q6UWI2 310 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 PDZD4Q76G19 769 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-224ENST00000494132 ADGRF2Q8IZF7 708 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 ELMOD1Q8N336 334 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 GOLGA5Q8TBA6 731 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 FGF14Q92915 247 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 LPIN3Q9BQK8 851 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 OXCT2Q9BYC2 517 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-224ENST00000494132 DNAJC25Q9H1X3 360 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 DDX43Q9NXZ2 648 aaKnown RBP15.8■□□□□ 0.12
ATG4B-224ENST00000494132 ABI2Q9NYB9 513 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-224ENST00000494132 CDH7Q9ULB5 785 aa15.8■□□□□ 0.12
ATG4B-224ENST00000494132 MYO1EQ12965 1108 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 HTR4Q13639 388 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 KCNB1Q14721 858 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 SOWAHAQ2M3V2 549 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 MGAT5BQ3V5L5 792 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 PRSS36Q5K4E3 855 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 ISM2Q6H9L7 571 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 IQCEQ6IPM2 695 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 RTL10Q7L3V2 364 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 ZNF512Q96ME7 567 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-224ENST00000494132 KXD1Q9BQD3 176 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 DMAC2Q9NW81 257 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 GDAP2Q9NXN4 497 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 IGSF9Q9P2J2 1179 aa15.79■□□□□ 0.12
ATG4B-224ENST00000494132 CIZ1Q9ULV3 898 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-224ENST00000494132 NUP210Q8TEM1 1887 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-224ENST00000494132 CALUO43852 315 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-224ENST00000494132 PHACTR2O75167 634 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 CFHP08603 1231 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 ATF6P18850 670 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 NR2F2P24468 414 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 ALDH1A3P47895 512 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 GPR15P49685 360 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 MYL6P60660 151 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 PSMC1P62191 440 aaKnown RBP15.78■□□□□ 0.12
ATG4B-224ENST00000494132 TSPY1Q01534 308 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 BIRC3Q13489 604 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 TDRD10Q5VZ19 366 aaKnown RBP15.78■□□□□ 0.12
ATG4B-224ENST00000494132 UBALD2Q8IYN6 164 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 SLC44A3Q8N4M1 653 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms