RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 RBP5P82980 135 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
UBA3-211ENST00000493957 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 TTI2Q6NXR4 508 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 OSTM1Q86WC4 334 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 LRRC52Q8N7C0 313 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 ZNF707Q96C28 371 aaPredicted RBP12.54□□□□□ -0.4
UBA3-211ENST00000493957 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 MED15Q96RN5 788 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SFXN1Q9H9B4 322 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 CD320Q9NPF0 282 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 PSMA7O14818 248 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 MAPK13O15264 365 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 LRRN2O75325 713 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 C8AP07357 584 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
UBA3-211ENST00000493957 PSMC2P35998 433 aaKnown RBP12.53□□□□□ -0.4
UBA3-211ENST00000493957 PNPLA4P41247 253 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 BIRC3Q13489 604 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 CBX2Q14781 532 aaPredicted RBP12.53□□□□□ -0.4
UBA3-211ENST00000493957 USP37Q86T82 979 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
UBA3-211ENST00000493957 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 TSG101Q99816 390 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 XYLT2Q9H1B5 865 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 CRISPLD1Q9H336 500 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 POMKQ9H5K3 350 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBA3-211ENST00000493957 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
UBA3-211ENST00000493957 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.4
UBA3-211ENST00000493957 CETN3O15182 167 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 CCL16O15467 120 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 ZMYND10O75800 440 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 ABLIM3O94929 683 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 CPB1P15086 417 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
UBA3-211ENST00000493957 RPL13P26373 211 aaKnown RBP12.52□□□□□ -0.41
UBA3-211ENST00000493957 GCLMP48507 274 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 NTHL1P78549 312 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 ZP2Q05996 745 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 LRRC63Q05C16 580 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 STIM1Q13586 685 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 SOWAHAQ2M3V2 549 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.41
UBA3-211ENST00000493957 ZACNQ401N2 412 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 C15orf39Q6ZRI6 1047 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 SV2AQ7L0J3 742 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 LRRTM3Q86VH5 581 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 TRIML1Q8N9V2 468 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.41
UBA3-211ENST00000493957 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 TMLHEQ9NVH6 421 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 GDAP2Q9NXN4 497 aa12.52□□□□□ -0.41
UBA3-211ENST00000493957 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 OR6C75A6NL08 312 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 PHACTR2O75167 634 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 SOAT2O75908 522 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 KRT13P13646 458 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 ITIH3Q06033 890 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 ADCY1Q08828 1119 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 PAK1Q13153 545 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 NCOA4Q13772 614 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 LIN9Q5TKA1 542 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 SPOPLQ6IQ16 392 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 SCARA5Q6ZMJ2 495 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 ADGRF2Q8IZF7 708 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 SMG7Q92540 1137 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 MRPL45Q9BRJ2 306 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms