RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MCM6Q14566 821 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 TMEM132DQ14C87 1099 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 LPAL2Q16609 132 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 SPEM1Q8N4L4 309 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 FIZ1Q96SL8 496 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 ATXN3LQ9H3M9 355 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 C8orf33Q9H7E9 229 aaPredicted RBP18.83■□□□□ 0.6
COL9A1-210ENST00000493682 RBM12Q9NTZ6 932 aaKnown RBP18.83■□□□□ 0.6
COL9A1-210ENST00000493682 HSFX1Q9UBD0 423 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 CDV3Q9UKY7 258 aaKnown RBP18.83■□□□□ 0.6
COL9A1-210ENST00000493682 RAB23Q9ULC3 237 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 ANO9A1A5B4 782 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 CYP11A1P05108 521 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
COL9A1-210ENST00000493682 PLCG1P19174 1290 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 GABRR2P28476 465 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 ACOT2P49753 483 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 LRRC32Q14392 662 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 WDR44Q5JSH3 913 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 GPR158Q5T848 1215 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 TXNDC11Q6PKC3 985 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 ITIH5Q86UX2 942 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 TTC8Q8TAM2 541 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 RAD54LQ92698 747 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 ZFYVE19Q96K21 471 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 DERAQ9Y315 318 aa18.82■□□□□ 0.6
COL9A1-210ENST00000493682 MYBPHLA2RUH7 354 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 ANKRD63C9JTQ0 380 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 SPECC1L-ADORA2AF8WAN1 911 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 DPYSL4O14531 572 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 NMT1P30419 496 aaKnown RBP18.81■□□□□ 0.6
COL9A1-210ENST00000493682 CTHP32929 405 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 TUFMP49411 452 aaKnown RBP18.81■□□□□ 0.6
COL9A1-210ENST00000493682 CDR1P51861 262 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 GTF2BQ00403 316 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 GRIN1Q05586 938 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 DMWDQ09019 674 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 SPEM2Q0P670 501 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 KARSQ15046 597 aaKnown RBP18.81■□□□□ 0.6
COL9A1-210ENST00000493682 SLC39A12Q504Y0 691 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 ARHGAP29Q52LW3 1261 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 ARHGAP15Q53QZ3 475 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 Q6ZS52 159 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 RALGPS2Q86X27 583 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-210ENST00000493682 SEPT5Q99719 369 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-210ENST00000493682 LPIN3Q9BQK8 851 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 ZCWPW1Q9H0M4 648 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 OBP2AQ9NY56 170 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
COL9A1-210ENST00000493682 TSC2P49815 1807 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 CHURC1-FNTBB4DL54 471 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 TISP43B9A030 160 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 HRO43593 1189 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 TBCAO75347 108 aaKnown RBP18.8■□□□□ 0.6
COL9A1-210ENST00000493682 CD2BP2O95400 341 aaKnown RBP18.8■□□□□ 0.6
COL9A1-210ENST00000493682 PRAMEF12O95522 483 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 ABCD1P33897 745 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 FNTBP49356 437 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 MGAT5BQ3V5L5 792 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 ZC2HC1CQ53FD0 456 aaPredicted RBP18.8■□□□□ 0.6
COL9A1-210ENST00000493682 DGKKQ5KSL6 1271 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 ADALQ6DHV7 355 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 PRR23BQ6ZRT6 265 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 FAM200AQ8TCP9 573 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 ASB7Q9H672 318 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 TASP1Q9H6P5 420 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 IL21Q9HBE4 155 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 DSEQ9UL01 958 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 C2CD2Q9Y426 696 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 NCOR2Q9Y618 2525 aa18.8■□□□□ 0.6
COL9A1-210ENST00000493682 K7ESF4 209 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 CYB561D2O14569 222 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 PAPSS2O95340 614 aaPredicted RBP18.79■□□□□ 0.6
COL9A1-210ENST00000493682 ATF6P18850 670 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 WEE1P30291 646 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 LONP1P36776 959 aaKnown RBP18.79■□□□□ 0.6
COL9A1-210ENST00000493682 CYP4F8P98187 520 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 TNK2Q07912 1038 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 SIM2Q14190 667 aaPredicted RBP18.79■□□□□ 0.6
COL9A1-210ENST00000493682 VEPH1Q14D04 833 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 METTL23Q86XA0 190 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 RASSF8Q8NHQ8 419 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 BPIFB1Q8TDL5 484 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
COL9A1-210ENST00000493682 C2orf42Q9NWW7 574 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 STYXL1Q9Y6J8 313 aa18.79■□□□□ 0.6
COL9A1-210ENST00000493682 NUP210Q8TEM1 1887 aaPredicted RBP18.78■□□□□ 0.6
COL9A1-210ENST00000493682 DCDC2BA2VCK2 349 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 BMP15O95972 392 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 RETP07949 1114 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 CDC25CP30307 473 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 TAF6P49848 677 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 SRSF5Q13243 272 aaKnown RBP18.78■□□□□ 0.6
COL9A1-210ENST00000493682 PON2Q15165 354 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 SLFN12LQ6IEE8 588 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 LRRTM3Q86VH5 581 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 GIPC2Q8TF65 315 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 LARP4BQ92615 738 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms