RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MTDHQ86UE4 582 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 LRRC6Q86X45 466 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 MB21D2Q8IYB1 491 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 SRRM1Q8IYB3 904 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ANKRD13AQ8IZ07 590 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 LINC00469Q8N7U9 141 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 Q8N9G6 341 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 RFWD2Q8NHY2 731 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CERKQ8TCT0 537 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 TRPC4APQ8TEL6 797 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 GIMAP1Q8WWP7 306 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 TAMM41Q96BW9 452 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 PRICKLE1Q96MT3 831 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 BTBD10Q9BSF8 475 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ADAM7Q9H2U9 754 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 PABPC3Q9H361 631 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 RNF41Q9H4P4 317 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 AIPL1Q9NZN9 384 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 GMIPQ9P107 970 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 TXNDC16Q9P2K2 825 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 PI4KBQ9UBF8 816 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 WDR81Q562E7 1941 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PDS5AQ29RF7 1337 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 A0A0G2JND7 137 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 LGALS16A8MUM7 142 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SGTAO43765 313 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 KCNJ13O60928 360 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 NOL3O60936 208 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 BBOX1O75936 387 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ACSL3O95573 720 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 RXRAP19793 462 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PMLP29590 882 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 IL15P40933 162 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 KRT6CP48668 564 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 RAB15P59190 212 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PFKPQ01813 784 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 DLG1Q12959 904 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 C10orf76Q5T2E6 689 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 LPCAT4Q643R3 524 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PLEKHA7Q6IQ23 1121 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 AAGABQ6PD74 315 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 HEATR4Q86WZ0 1026 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 FAR2Q96K12 515 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 C8orf37Q96NL8 207 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 GCNAQ96QF7 691 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 VPS35Q96QK1 796 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 TBCBQ99426 244 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 IER2Q9BTL4 223 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 MTMR12Q9C0I1 747 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC134Q9H6E4 229 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SMYD3Q9H7B4 428 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SEC31BQ9NQW1 1179 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 THAP1Q9NVV9 213 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 HMGXB4Q9UGU5 601 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CNTNAP4Q9C0A0 1308 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 RANBP6O60518 1105 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 HSPA1LP34931 641 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 KRT20P35900 424 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SLC1A4P43007 532 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 DSTNP60981 165 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CYP2A13Q16696 494 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 TXNRD1Q16881 649 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC58Q4VC31 144 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ITIH5Q86UX2 942 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 MMAAQ8IVH4 418 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 HACE1Q8IYU2 909 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 POU5F2Q8N7G0 328 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SLC26A7Q8TE54 656 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CKAP2Q8WWK9 683 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 WNK4Q96J92 1243 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PLEKHA8Q96JA3 519 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PURBQ96QR8 312 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ZC4H2Q9NQZ6 224 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 USP40Q9NVE5 1235 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 PHTF1Q9UMS5 762 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 TRIM49BA6NDI0 452 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 J3QRK9 145 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF263O14978 683 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 GSC2O15499 205 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 AQP9O43315 295 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CREB1P16220 341 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 JAK1P23458 1154 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 HAND2P61296 217 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 LMNB2Q03252 620 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SGO2Q562F6 1265 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 RABGAP1LQ5R372 815 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 IL23RQ5VWK5 629 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SUSD4Q5VX71 490 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 USP49Q70CQ1 688 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 LSMEM1Q8N8F7 131 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 DDI1Q8WTU0 396 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ANKRD49Q8WVL7 239 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SLC7A3Q8WY07 619 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 OSBP2Q969R2 916 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 FBXL8Q96CD0 374 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SHISA4Q96DD7 197 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms