RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 INCA1Q0VD86 236 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 SPECC1LQ69YQ0 1117 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 DPY19L2P1Q6NXN4 242 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 SCARA5Q6ZMJ2 495 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 RRAGAQ7L523 313 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 VSTM4Q8IW00 320 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 POF1BQ8WVV4 589 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 GANQ9H2C0 597 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 SMYD3Q9H7B4 428 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 CEP72Q9P209 647 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 MYO6Q9UM54 1294 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 GBF1Q92538 1859 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 A8MXQ7 604 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 GRM6O15303 877 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 NOL4O94818 638 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 CXCL14O95715 111 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 TSPY1Q01534 308 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 CTXN3Q4LDR2 81 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 KIAA0319Q5VV43 1072 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 IQCEQ6IPM2 695 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 TAS1R1Q7RTX1 841 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 CACNA2D4Q7Z3S7 1137 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 PPFIBP1Q86W92 1011 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 KBTBD7Q8WVZ9 684 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 TNIP3Q96KP6 325 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 KREMEN1Q96MU8 473 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 MRPL45Q9BRJ2 306 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 NT5C1AQ9BXI3 368 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 NAA15Q9BXJ9 866 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 EMILIN2Q9BXX0 1053 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 NUCKS1Q9H1E3 243 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 CISHQ9NSE2 258 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 DDX43Q9NXZ2 648 aaKnown RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 FNIP2Q9P278 1114 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
LSM2-214ENST00000493387 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
LSM2-214ENST00000493387 A0A1W2PQJ5 194 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 FSCN2O14926 492 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 AP5Z1O43299 807 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 LILRB3O75022 631 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 CILPO75339 1184 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 ADCY5O95622 1261 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 C1RP00736 705 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 CCDC172P0C7W6 258 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 CDC25BP30305 580 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 STAT1P42224 750 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 KLK7P49862 253 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 CDH8P55286 799 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 BPIFB4P59827 614 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 DRAP1Q14919 205 aaPredicted RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 PSMD5Q16401 504 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 ARHGAP44Q17R89 818 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 RTP2Q5QGT7 225 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 UBR7Q8N806 425 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
LSM2-214ENST00000493387 SHC3Q92529 594 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 PPP2R3CQ969Q6 453 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 KIAA1257Q9ULG3 409 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 CNTN6Q9UQ52 1028 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms