RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TNK2Q07912 1038 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 ENOX2Q16206 610 aaKnown RBP23.3■■□□□ 1.32
PFDN4-205ENST00000493356 ARHGAP15Q53QZ3 475 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 ITIH5Q86UX2 942 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 WDR5BQ86VZ2 330 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 SYNPOQ8N3V7 929 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.3■■□□□ 1.32
PFDN4-205ENST00000493356 HSFX1Q9UBD0 423 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 CHD6Q8TD26 2715 aa23.3■■□□□ 1.32
PFDN4-205ENST00000493356 FAM189A1O60320 539 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 WEE1P30291 646 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 SLC12A3P55017 1021 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 NCKAP1LP55160 1127 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 LILRA4P59901 499 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 CACNB1Q02641 598 aaPredicted RBP23.29■■□□□ 1.32
PFDN4-205ENST00000493356 ARMCX5Q6P1M9 558 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 BPIFB1Q8TDL5 484 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 SENP8Q96LD8 212 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 TASP1Q9H6P5 420 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 KCND2Q9NZV8 630 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 ZFHX4Q86UP3 3567 aa23.29■■□□□ 1.32
PFDN4-205ENST00000493356 NPHP3-ACAD11A0A0J9YXS1 232 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 H0YCG3 227 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 ADRB2P07550 413 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 ODC1P11926 461 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 PLCB2Q00722 1185 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 KYAT1Q16773 422 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 SPATA1Q5VX52 437 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 OR10T2Q8NGX3 314 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 KCNN1Q92952 543 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 TSPAN18Q96SJ8 248 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 PLIN2Q99541 437 aa23.28■■□□□ 1.32
PFDN4-205ENST00000493356 LARSQ9P2J5 1176 aaKnown RBP23.28■■□□□ 1.32
PFDN4-205ENST00000493356 OGTO15294 1046 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 SEC24BO95487 1268 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 PLA2G4BP0C869 781 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 LIG4P49917 911 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 CYP4F8P98187 520 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 DDX1Q92499 740 aaKnown RBP23.27■■□□□ 1.32
PFDN4-205ENST00000493356 ZSCAN31Q96LW9 406 aaPredicted RBP23.27■■□□□ 1.32
PFDN4-205ENST00000493356 LPIN3Q9BQK8 851 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 RPF1Q9H9Y2 349 aaKnown RBP23.27■■□□□ 1.32
PFDN4-205ENST00000493356 IL21Q9HBE4 155 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 CFAP47Q6ZTR5 3102 aa23.27■■□□□ 1.32
PFDN4-205ENST00000493356 HNRNPDLO14979 420 aaKnown RBP23.26■■□□□ 1.31
PFDN4-205ENST00000493356 EXTL3O43909 919 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 EIF5BO60841 1220 aaKnown RBP23.26■■□□□ 1.31
PFDN4-205ENST00000493356 ATF6P18850 670 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 TUFMP49411 452 aaKnown RBP23.26■■□□□ 1.31
PFDN4-205ENST00000493356 ITPRIPL2Q3MIP1 535 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 ARSHQ5FYA8 562 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 JADE1Q6IE81 842 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 PKN3Q6P5Z2 889 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 SEPT5Q99719 369 aaPredicted RBP23.26■■□□□ 1.31
PFDN4-205ENST00000493356 SH2B1Q9NRF2 756 aaPredicted RBP23.26■■□□□ 1.31
PFDN4-205ENST00000493356 SCN1AP35498 2009 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 CEP295Q9C0D2 2601 aa23.26■■□□□ 1.31
PFDN4-205ENST00000493356 DENND4CQ5VZ89 1909 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 AXIN1O15169 862 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 PIGRP01833 764 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 CYP11A1P05108 521 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 KCNA4P22459 653 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 PAX3P23760 479 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 MCM2P49736 904 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 LIMK1P53667 647 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 ATP2C1P98194 919 aaPredicted RBP23.25■■□□□ 1.31
PFDN4-205ENST00000493356 VEPH1Q14D04 833 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 SF3A2Q15428 464 aaKnown RBP23.25■■□□□ 1.31
PFDN4-205ENST00000493356 AASDHQ4L235 1098 aaPredicted RBP23.25■■□□□ 1.31
PFDN4-205ENST00000493356 SLC39A12Q504Y0 691 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 C9orf57Q5W0N0 161 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 IL31Q6EBC2 164 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 GAB3Q8WWW8 586 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 FAM212AQ96EL1 285 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 CHAMP1Q96JM3 812 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 SLC46A2Q9BY10 475 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 SMG9Q9H0W8 520 aaKnown RBP23.25■■□□□ 1.31
PFDN4-205ENST00000493356 ARRDC1-AS1Q9H2J1 176 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 THG1LQ9NWX6 298 aaKnown RBP23.25■■□□□ 1.31
PFDN4-205ENST00000493356 TBX20Q9UMR3 447 aa23.25■■□□□ 1.31
PFDN4-205ENST00000493356 A0A0B4J269 797 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 PIRO00625 290 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 CDC25CP30307 473 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 PXNP49023 591 aaPredicted RBP23.24■■□□□ 1.31
PFDN4-205ENST00000493356 CDR1P51861 262 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 MGAT5BQ3V5L5 792 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 TMEM119Q4V9L6 283 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 CD302Q8IX05 232 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 CDK5RAP3Q96JB5 506 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 LOXL4Q96JB6 756 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 GCNAQ96QF7 691 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 ZCWPW1Q9H0M4 648 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 GKN1Q9NS71 199 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 CPSF3Q9UKF6 684 aaKnown RBP23.24■■□□□ 1.31
PFDN4-205ENST00000493356 ODF2LQ9ULJ1 636 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 ATG2BQ96BY7 2078 aa23.24■■□□□ 1.31
PFDN4-205ENST00000493356 EML5Q05BV3 1969 aa23.23■■□□□ 1.31
PFDN4-205ENST00000493356 CCDC163A0A0D9SF12 145 aa23.23■■□□□ 1.31
PFDN4-205ENST00000493356 ANO9A1A5B4 782 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms