RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
LIME1-208ENST00000493265 ELAVL2Q12926 359 aaKnown RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 GPM6BQ13491 265 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 CUL2Q13617 745 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 SOWAHAQ2M3V2 549 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 KLHDC7AQ5VTJ3 777 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 DDX53Q86TM3 631 aaKnown RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 METTL23Q86XA0 190 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 ADGRF2Q8IZF7 708 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 PDCL2Q8N4E4 241 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 MRPL45Q9BRJ2 306 aaKnown RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 C11orf84Q9BUA3 381 aaPredicted RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 SDCBP2Q9H190 292 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 SNX25Q9H3E2 840 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 PUF60Q9UHX1 559 aaKnown RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 DNAJC12Q9UKB3 198 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 AJAP1Q9UKB5 411 aaPredicted RBP18.4■□□□□ 0.54
LIME1-208ENST00000493265 FHOD1Q9Y613 1164 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 A0A1W2PQC6 194 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 EPHB6O15197 1021 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 GRM6O15303 877 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 RB1P06400 928 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 PAX3P23760 479 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
LIME1-208ENST00000493265 PLCB3Q01970 1234 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 RAPGEF1Q13905 1077 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 IQCEQ6IPM2 695 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 TOP6BLQ8N6T0 577 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 POF1BQ8WVV4 589 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 AUTS2Q8WXX7 1259 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 RIN2Q8WYP3 895 aaPredicted RBP18.39■□□□□ 0.53
LIME1-208ENST00000493265 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.53
LIME1-208ENST00000493265 LRFN3Q9BTN0 628 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 TTPALQ9BTX7 342 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 PLXNA4Q9HCM2 1894 aa18.39■□□□□ 0.53
LIME1-208ENST00000493265 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 C5orf67F2Z3F1 127 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 HCRTO43612 131 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 ADCY5O95622 1261 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 SOD2P04179 222 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 TRIM21P19474 475 aaKnown RBP18.38■□□□□ 0.53
LIME1-208ENST00000493265 USP8P40818 1118 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 MFAP3P55082 362 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 ORC1Q13415 861 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 RTP2Q5QGT7 225 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 OVOS1Q6IE37 1185 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 DPY19L2P1Q6NXN4 242 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 PRSS55Q6UWB4 352 aaPredicted RBP18.38■□□□□ 0.53
LIME1-208ENST00000493265 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.38■□□□□ 0.53
LIME1-208ENST00000493265 TMC7Q7Z402 723 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 OSTM1Q86WC4 334 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 GPIHBP1Q8IV16 184 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 OR6B3Q8NGW1 331 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 SPPL3Q8TCT6 385 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 MICAL1Q8TDZ2 1067 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 CPLX3Q8WVH0 158 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 KREMEN1Q96MU8 473 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 HERC2P3Q9BVR0 1158 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 BCO2Q9BYV7 579 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 GANQ9H2C0 597 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 PLCB1Q9NQ66 1216 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 ENTPD7Q9NQZ7 604 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 LMCD1Q9NZU5 365 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 DSEQ9UL01 958 aa18.38■□□□□ 0.53
LIME1-208ENST00000493265 SYN3O14994 580 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 NOL4O94818 638 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 URODP06132 367 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 PDGFRBP09619 1106 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 UCHL3P15374 230 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 FGFR3P22607 806 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
LIME1-208ENST00000493265 ACAT1P24752 427 aaKnown RBP18.37■□□□□ 0.53
LIME1-208ENST00000493265 DNAJB1P25685 340 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 PBX1P40424 430 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 GLUD2P49448 558 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 CDR1P51861 262 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 YWHAHQ04917 246 aaPredicted RBP18.37■□□□□ 0.53
LIME1-208ENST00000493265 VARS2Q5ST30 1063 aaKnown RBP18.37■□□□□ 0.53
LIME1-208ENST00000493265 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 TMC6Q7Z403 805 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 KBTBD7Q8WVZ9 684 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 UBE2ZQ9H832 354 aaPredicted RBP18.37■□□□□ 0.53
LIME1-208ENST00000493265 CYP3A43Q9HB55 503 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 CISHQ9NSE2 258 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
LIME1-208ENST00000493265 FAM86C2PA6NEL3 165 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 A8MXQ7 604 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 H3BNC9 293 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 EFEMP2O95967 443 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
LIME1-208ENST00000493265 KRT5P13647 590 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 RPL17P18621 184 aaKnown RBP18.36■□□□□ 0.53
LIME1-208ENST00000493265 TYMPP19971 482 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 LMO2P25791 158 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 GNL1P36915 607 aaPredicted RBP18.36■□□□□ 0.53
LIME1-208ENST00000493265 MRE11P49959 708 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 ARPP19P56211 112 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms