RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MMRN2Q9H8L6 949 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 ZDHHC7Q9NXF8 308 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 PRRG1O14668 218 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 STX10O60499 249 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ZMYND10O75800 440 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ABLIM3O94929 683 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
CLIP2-209ENST00000493166 WEE2P0C1S8 567 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ATF2P15336 505 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ATICP31939 592 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 GCLMP48507 274 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 MYL7Q01449 175 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 CBX2Q14781 532 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 WDR72Q3MJ13 1102 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ATAT1Q5SQI0 421 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 GPR149Q86SP6 731 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 OR10T2Q8NGX3 314 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 NECTIN4Q96NY8 510 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 MMS19Q96T76 1030 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 PIDD1Q9HB75 910 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-209ENST00000493166 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
CLIP2-209ENST00000493166 RWDD2AQ9UIY3 292 aa13.72□□□□□ -0.21
CLIP2-209ENST00000493166 NOTCH4Q99466 2003 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 VNN1O95497 513 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 FGFR1OPO95684 399 aaKnown RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 HNRNPA1P09651 372 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 HOXA9P31269 272 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 GTF2H1P32780 548 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 LHX1P48742 406 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 NLRP12P59046 1061 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 TSPY1Q01534 308 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 GPR17Q13304 367 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 SOWAHAQ2M3V2 549 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 FILIP1Q7Z7B0 1213 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 SPATA18Q8TC71 538 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 PGLYRP2Q96PD5 576 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 RTP3Q9BQQ7 232 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 TMEM8AQ9HCN3 771 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 NXF1Q9UBU9 619 aaKnown RBP13.71□□□□□ -0.21
CLIP2-209ENST00000493166 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 DACH1Q9UI36 760 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
CLIP2-209ENST00000493166 DOCK8Q8NF50 2099 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 CCL16O15467 120 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 XYLBO75191 536 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 MXI1P50539 228 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 SGSM1Q2NKQ1 1148 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 KRT39Q6A163 491 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 FRMD5Q7Z6J6 570 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 DCP1BQ8IZD4 617 aaKnown RBP13.7□□□□□ -0.22
CLIP2-209ENST00000493166 ZNF707Q96C28 371 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-209ENST00000493166 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-209ENST00000493166 RHOBTB2Q9BYZ6 727 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 POMKQ9H5K3 350 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 VRTNQ9H8Y1 702 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 GREB1Q4ZG55 1949 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
CLIP2-209ENST00000493166 TRIOO75962 3097 aa13.69□□□□□ -0.22
CLIP2-209ENST00000493166 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
CLIP2-209ENST00000493166 GABRDO14764 452 aa13.69□□□□□ -0.22
CLIP2-209ENST00000493166 PAPLNO95428 1278 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms