RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 MICAL2O94851 1124 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 GJA1P17302 382 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 RFX1P22670 979 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 PNPLA4P41247 253 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 ALDH1A3P47895 512 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 EPHB3P54753 998 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 PLD1Q13393 1074 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 SLC39A12Q504Y0 691 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 LMBRD2Q68DH5 695 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-207ENST00000492954 TANGO2Q6ICL3 276 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 CBWD2Q8IUF1 395 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 CEP57L1Q8IYX8 460 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 CSGALNACT2Q8N6G5 542 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 CXorf38Q8TB03 319 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-207ENST00000492954 SCFD1Q8WVM8 642 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 ZSWIM3Q96MP5 696 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 PLA2G2FQ9BZM2 168 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 SERTAD1Q9UHV2 236 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 SIX4Q9UIU6 781 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 ITGA11Q9UKX5 1188 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 PTPRJQ12913 1337 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 ZNF233A6NK53 670 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 TGFB1I1O43294 461 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 ACTN4O43707 911 aaKnown RBP19.42■□□□□ 0.7
PTPRU-207ENST00000492954 ECI2O75521 394 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 TMEM191BP0C7N4 346 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 SLFN14P0C7P3 912 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 FCARP24071 287 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 MRE11P49959 708 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 BFSP1Q12934 665 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 FAM78AQ5JUQ0 283 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 TMC8Q8IU68 726 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 THEM5Q8N1Q8 247 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 PDCL2Q8N4E4 241 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 LEMD2Q8NC56 503 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 LRRC3Q9BY71 257 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 SLC39A2Q9NP94 309 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 AGPAT3Q9NRZ7 376 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 UBE4BO95155 1302 aa19.42■□□□□ 0.7
PTPRU-207ENST00000492954 PVALEFA0A1B0GWK0 134 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 CLIC2O15247 247 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 KRT19P08727 400 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 PFKFB1P16118 471 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
PTPRU-207ENST00000492954 TEAD2Q15562 447 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 LRRTM3Q86VH5 581 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 LRRC52Q8N7C0 313 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 OR5B17Q8NGF7 314 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 SHKBP1Q8TBC3 707 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 ATOH1Q92858 354 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-207ENST00000492954 ELSPBP1Q96BH3 223 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 ASB16Q96NS5 453 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 SEPT5Q99719 369 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-207ENST00000492954 INTS13Q9NVM9 706 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 HSFX1Q9UBD0 423 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 L1RE1Q9UN81 338 aa19.41■□□□□ 0.7
PTPRU-207ENST00000492954 A0A1B0GVL5 298 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 A0A1W2PRU2 124 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 CMA1P23946 247 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 CYP2J2P51589 502 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 KRT85P78386 507 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 RBP5P82980 135 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 MGAT5BQ3V5L5 792 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 PHLDB3Q6NSJ2 640 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 CCDC105Q8IYK2 499 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 RDH13Q8NBN7 331 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 PAGE5Q96GU1 130 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 ANKRD36BP1Q96IX9 119 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 LPIN3Q9BQK8 851 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 FOXQ1Q9C009 403 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 KIAA1586Q9HCI6 787 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 ZFP14Q9HCL3 533 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 ZNF334Q9HCZ1 680 aaPredicted RBP19.4■□□□□ 0.7
PTPRU-207ENST00000492954 ASB3Q9Y575 518 aa19.4■□□□□ 0.7
PTPRU-207ENST00000492954 KLRC4O43908 158 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 HUS1O60921 280 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 TUFMP49411 452 aaKnown RBP19.39■□□□□ 0.69
PTPRU-207ENST00000492954 PFKPQ01813 784 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 GRM2Q14416 872 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 SNRNP35Q16560 246 aaKnown RBP19.39■□□□□ 0.69
PTPRU-207ENST00000492954 BMT2Q1RMZ1 405 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 SLC44A4Q53GD3 710 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 HS2ST1Q7LGA3 356 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 DNAJB7Q7Z6W7 309 aaPredicted RBP19.39■□□□□ 0.69
PTPRU-207ENST00000492954 DTWD2Q8NBA8 298 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 SMARCD2Q92925 531 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 PSMG2Q969U7 264 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 IRF2BPLQ9H1B7 796 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 SLITRK6Q9H5Y7 841 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 GDAP2Q9NXN4 497 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 ABI2Q9NYB9 513 aaPredicted RBP19.39■□□□□ 0.69
PTPRU-207ENST00000492954 SNX9Q9Y5X1 595 aa19.39■□□□□ 0.69
PTPRU-207ENST00000492954 TNNC2P02585 160 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 DCNP07585 359 aaKnown RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 ATF6P18850 670 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 STARD6P59095 220 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 TSPY1Q01534 308 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 COL4A3Q01955 1670 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms