RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 CYP4F11Q9HBI6 524 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 DDX43Q9NXZ2 648 aaKnown RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 FBXW11Q9UKB1 542 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 GRXCR2A6NFK2 248 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 PRRG1O14668 218 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 RFPL2O75678 378 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 C8AP07357 584 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 P4HA1P13674 534 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 ATF2P15336 505 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 MXI1P50539 228 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 MYL7Q01449 175 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 TSPY1Q01534 308 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 ADCY1Q08828 1119 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 GPR17Q13304 367 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 PPM1LQ5SGD2 360 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 ATAT1Q5SQI0 421 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 OR10T2Q8NGX3 314 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 TAS1R2Q8TE23 839 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 TAF4BQ92750 862 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 ELMO3Q96BJ8 720 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 PGLYRP2Q96PD5 576 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 MED15Q96RN5 788 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 TMEM209Q96SK2 561 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 PI4K2AQ9BTU6 479 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 VRTNQ9H8Y1 702 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 PIDD1Q9HB75 910 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■■■■ 102.1
CCM2-217ENST00000492883 ANO10Q9NW15 660 aa14.98□□□□□ -0.01
CCM2-217ENST00000492883 AFF4Q9UHB7 1163 aaKnown RBP14.98□□□□□ -0.01
CCM2-217ENST00000492883 USP15Q9Y4E8 981 aaPredicted RBP14.98□□□□□ -0.01
CCM2-217ENST00000492883 CITO14578 2027 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 MYO9BQ13459 2157 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 ZMYND10O75800 440 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 BMP1P13497 986 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 IL9P15248 144 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 GNL1P36915 607 aaPredicted RBP14.97□□□□□ -0.01
CCM2-217ENST00000492883 KLHL40Q2TBA0 621 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 RNF19BQ6ZMZ0 732 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
CCM2-217ENST00000492883 FBXL13Q8NEE6 735 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 OR6B3Q8NGW1 331 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 SLC7A14Q8TBB6 771 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 SLC35C1Q96A29 364 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 RTP3Q9BQQ7 232 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 ACBD6Q9BR61 282 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 MRPL45Q9BRJ2 306 aaKnown RBP14.97□□□□□ -0.01
CCM2-217ENST00000492883 ZCWPW1Q9H0M4 648 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 SNX25Q9H3E2 840 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 RAB20Q9NX57 234 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 ZDHHC7Q9NXF8 308 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 MAFFQ9ULX9 164 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
CCM2-217ENST00000492883 GABRDO14764 452 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 TACC1O75410 805 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 ASS1P00966 412 aaKnown RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 PDGFRBP09619 1106 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 WARSP23381 471 aaKnown RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 ACAT1P24752 427 aaKnown RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 PCSK1P29120 753 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 MTHFRP42898 656 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 SMAD2Q15796 467 aaKnown RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 STX1AQ16623 288 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 CBWD6Q4V339 395 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 SLC39A12Q504Y0 691 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 WDR44Q5JSH3 913 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 CBWD3Q5JTY5 395 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 CBWD5Q5RIA9 395 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 SPOPLQ6IQ16 392 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 RTL10Q7L3V2 364 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 LIMS2Q7Z4I7 341 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 GPR149Q86SP6 731 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 OSTM1Q86WC4 334 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 CMASQ8NFW8 434 aaPredicted RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 SMG7Q92540 1137 aaKnown RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 PRKD2Q9BZL6 878 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 THAP9Q9H5L6 903 aa14.96□□□□□ -0.01
CCM2-217ENST00000492883 MAGEC2Q9UBF1 373 aaPredicted RBP14.96□□□□□ -0.01
CCM2-217ENST00000492883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.96□□□□□ -0.01
CCM2-217ENST00000492883 CCL16O15467 120 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 N4BP1O75113 896 aaKnown RBP14.95□□□□□ -0.02
CCM2-217ENST00000492883 XYLBO75191 536 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 SEC24AO95486 1093 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 LRG1P02750 347 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCM2-217ENST00000492883 LMO2P25791 158 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 FMO5P49326 533 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 CDR1P51861 262 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 CDH8P55286 799 aa14.95□□□□□ -0.02
CCM2-217ENST00000492883 MARSP56192 900 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms