RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 KLHDC10Q6PID8 442 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PTCHD4Q6ZW05 846 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RHOUQ7L0Q8 258 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KRT25Q7Z3Z0 450 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CYP2U1Q7Z449 544 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 THAP5Q7Z6K1 395 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 STK32CQ86UX6 486 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CHD1LQ86WJ1 897 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ETFBKMTQ8IXQ9 262 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF511Q8NB15 262 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SMC1BQ8NDV3 1235 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 C3orf58Q8NDZ4 430 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 OR2W6PQ8NHA6 318 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SYN2Q92777 582 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ACSF2Q96CM8 615 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SLC47A1Q96FL8 570 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 AHCYL2Q96HN2 611 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 NOX5Q96PH1 765 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SLC2A13Q96QE2 648 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CDC6Q99741 560 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 COQ7Q99807 217 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 LPIN3Q9BQK8 851 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CNPPD1Q9BV87 410 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KIFC3Q9BVG8 833 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PACSIN1Q9BY11 444 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ADAM19Q9H013 955 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PAIP1Q9H074 479 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM60Q9H2L4 133 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 HAUS4Q9H6D7 363 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TASP1Q9H6P5 420 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 EPS8L2Q9H6S3 715 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CNTD2Q9H8S5 307 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ZMAT3Q9HA38 289 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CLK4Q9HAZ1 481 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 LY9Q9HBG7 655 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 EHD2Q9NZN4 543 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CABP1Q9NZU7 370 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 C5AR2Q9P296 337 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CACNG4Q9UBN1 327 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TUBGCP4Q9UGJ1 667 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SLC39A10Q9ULF5 831 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 DDX19BQ9UMR2 479 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 AURKCQ9UQB9 309 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PCDHGA1Q9Y5H4 931 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 IQANK1A0A1B0GTG1 560 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 EME2A4GXA9 379 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 FAM227AF5H4B4 570 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 H0YIN7 160 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 NDUFS8O00217 210 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 FFAR2O15552 330 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CIDEAO60543 219 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 BCAS2O75934 225 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 FGF18O76093 207 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 REC8O95072 547 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KRT14P02533 472 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 WEE2P0C1S8 567 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 GAAP10253 952 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SNRPBP14678 240 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CCNA2P20248 432 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CASTP20810 708 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PDCP20941 246 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KCNA5P22460 613 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PRKACBP22694 351 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 AKAP5P24588 427 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CTNNA2P26232 953 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 HOXA6P31267 233 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CIITAP33076 1130 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ADRA1BP35368 520 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 THPOP40225 353 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 STAT5BP51692 787 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SSTP61278 116 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TRA2BP62995 288 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 NKX3-2P78367 333 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CBX1P83916 185 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TLE2Q04725 743 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KDSRQ06136 332 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RALGDSQ12967 914 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 USP4Q13107 963 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 STIM1Q13586 685 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 COTL1Q14019 142 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TRIM25Q14258 630 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PLS1Q14651 629 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SMAD2Q15796 467 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF124Q15973 351 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PFKFB4Q16877 469 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 HSF5Q4G112 596 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TOR1AIP1Q5JTV8 583 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TRAPPC3LQ5T215 181 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 NDUFAF5Q5TEU4 345 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RNF220Q5VTB9 566 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SNX30Q5VWJ9 437 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TWF2Q6IBS0 349 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 DESI1Q6ICB0 168 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF704Q6ZNC4 412 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 BRAPQ7Z569 592 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ADGRG6Q86SQ4 1221 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TTC6Q86TZ1 520 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 FAM83AQ86UY5 434 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 MOGAT3Q86VF5 341 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms