RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZFYVE26Q68DK2 2539 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 AXIN1O15169 862 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 OAZ2O95190 189 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 LARGE1O95461 756 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF806P0C7X5 589 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 IGF2RP11717 2491 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 KCNA4P22459 653 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 RAP1GAPP47736 663 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 KPNA1P52294 538 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-213ENST00000492506 CCDC6Q16204 474 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF568Q3ZCX4 644 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 CCDC183Q5T5S1 534 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 IL31Q6EBC2 164 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 PKN3Q6P5Z2 889 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 PHLPP2Q6ZVD8 1323 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 CEP68Q76N32 757 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ARID3BQ8IVW6 561 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-213ENST00000492506 DAW1Q8N136 415 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 TMEM130Q8N3G9 435 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 APPL2Q8NEU8 664 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 NUP205Q92621 2012 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ZFYVE19Q96K21 471 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ACAP3Q96P50 834 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
HDAC3-213ENST00000492506 ARRDC1-AS1Q9H2J1 176 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 TMEM134Q9H6X4 195 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
HDAC3-213ENST00000492506 M0QZQ0 153 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 EXTL3O43909 919 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 EPN2O95208 641 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 MCF2P10911 925 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 CPB1P15086 417 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 MUTP22033 750 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 NPTX2P47972 431 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 PEX3P56589 373 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 PON2Q15165 354 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 SLC10A6Q3KNW5 377 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 AASDHQ4L235 1098 aaPredicted RBP14.27□□□□□ -0.13
HDAC3-213ENST00000492506 PLA2G2CQ5R387 149 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 TEX35Q5T0J7 233 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 GAREM2Q75VX8 874 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 YAF2Q8IY57 180 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 SYNPOQ8N3V7 929 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.13
HDAC3-213ENST00000492506 TTC8Q8TAM2 541 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 ERMNQ8TAM6 284 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 GAB3Q8WWW8 586 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 LOXL4Q96JB6 756 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 SLITRK6Q9H5Y7 841 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 FAM53CQ9NYF3 392 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 BCCIPQ9P287 314 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC3-213ENST00000492506 ARHGAP28Q9P2N2 729 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 TUBGCP4Q9UGJ1 667 aa14.27□□□□□ -0.13
HDAC3-213ENST00000492506 VGLL3A8MV65 326 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 KIF2AO00139 706 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 FOSBP53539 338 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 TNK2Q07912 1038 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 DUSP4Q13115 394 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 ME3Q16798 604 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 ARHGAP29Q52LW3 1261 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 STPG1Q5TH74 334 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 KBTBD6Q86V97 674 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 TXLNBQ8N3L3 684 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 KIF18AQ8NI77 898 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 ZBTB45Q96K62 511 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 PGLYRP2Q96PD5 576 aa14.26□□□□□ -0.13
HDAC3-213ENST00000492506 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
HDAC3-213ENST00000492506 CCDC163A0A0D9SF12 145 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 CCDC169A6NNP5 214 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 JAK2O60674 1132 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 KCNK5O95279 499 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 PRAMEF12O95522 483 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 PROS1P07225 676 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 OR52Z1P0C646 297 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 PXNP49023 591 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 YWHAHQ04917 246 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 MAPK7Q13164 816 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 GPR17Q13304 367 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 SEZ6Q53EL9 994 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 CACNA2D4Q7Z3S7 1137 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 DNAJB7Q7Z6W7 309 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 C12orf50Q8NA57 414 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 CHFRQ96EP1 664 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 OBP2AQ9NY56 170 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 KIAA1024Q9UPX6 916 aa14.25□□□□□ -0.13
HDAC3-213ENST00000492506 TIMM13Q9Y5L4 95 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-213ENST00000492506 SCN1AP35498 2009 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 RPP40O75818 363 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms