RNA–Protein interactions for RNA: ENST00000492185.5

NELFE-211, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-211ENST00000492185 ELOVL4Q9GZR5 314 aa21.2■□□□□ 0.99
NELFE-211ENST00000492185 UPF3AQ9H1J1 476 aaKnown RBP21.2■□□□□ 0.99
NELFE-211ENST00000492185 MED4Q9NPJ6 270 aa21.2■□□□□ 0.99
NELFE-211ENST00000492185 A0A0U1RQG5 324 aaPredicted RBP21.2■□□□□ 0.98
NELFE-211ENST00000492185 FAM187AA6NFU0 413 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 TMEM191CA6NGB0 347 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 FSCN2O14926 492 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 MED7O43513 233 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 PSTPIP1O43586 416 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 GUCY2FP51841 1108 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 GSCP56915 257 aaPredicted RBP21.2■□□□□ 0.98
NELFE-211ENST00000492185 LACTBP83111 547 aaPredicted RBP21.2■□□□□ 0.98
NELFE-211ENST00000492185 DHX34Q14147 1143 aaKnown RBP21.2■□□□□ 0.98
NELFE-211ENST00000492185 DENND1BQ6P3S1 775 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 NME8Q8N427 588 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 PPP1R13LQ8WUF5 828 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 KIF12Q96FN5 646 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 TWNKQ96RR1 684 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 EIF2AQ9BY44 585 aaKnown RBP21.2■□□□□ 0.98
NELFE-211ENST00000492185 PCYOX1Q9UHG3 505 aa21.2■□□□□ 0.98
NELFE-211ENST00000492185 C17orf102A2RUQ5 167 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 TTI1O43156 1089 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 CHRNA3P32297 505 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 GJA9P57773 515 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 ZNF200P98182 395 aaPredicted RBP21.19■□□□□ 0.98
NELFE-211ENST00000492185 PTPN11Q06124 597 aaPredicted RBP21.19■□□□□ 0.98
NELFE-211ENST00000492185 PHLDB2Q86SQ0 1253 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 TMEM40Q8WWA1 233 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 GDAP1L1Q96MZ0 367 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 ZIC5Q96T25 663 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 SNTG2Q9NY99 539 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 CNTN3Q9P232 1028 aa21.19■□□□□ 0.98
NELFE-211ENST00000492185 FAM153BP0C7A2 387 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 GNAT1P11488 350 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 PTGIRP43119 386 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 CRYBB1P53674 252 aaPredicted RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 TAP1Q03518 808 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 FAM153CQ494X1 144 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 XKR4Q5GH76 650 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 IFT81Q8WYA0 676 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 ZMAT2Q96NC0 199 aaKnown RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 TSPAN18Q96SJ8 248 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 PLVAPQ9BX97 442 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 CXCL16Q9H2A7 254 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 PLEKHA4Q9H4M7 779 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 HMGXB4Q9UGU5 601 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 IP6K2Q9UHH9 426 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 FAM153AQ9UHL3 310 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 BARX2Q9UMQ3 279 aaPredicted RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 CEP83Q9Y592 693 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 MYADML2A6NDP7 307 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 AGPSO00116 658 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 TLR3O15455 904 aaKnown RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 TSEN2Q8NCE0 465 aaKnown RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 C3orf20Q8ND61 904 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 FAM71BQ8TC56 605 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 TMEM176AQ96HP8 235 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 CELF4Q9BZC1 486 aaKnown RBP21.18■□□□□ 0.98
NELFE-211ENST00000492185 GINS2Q9Y248 185 aa21.18■□□□□ 0.98
NELFE-211ENST00000492185 TCRBV7S2A1N4TA0A589 114 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 DRG2P55039 364 aaKnown RBP21.17■□□□□ 0.98
NELFE-211ENST00000492185 FCGRTP55899 365 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 TAS2R40P59535 323 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 FAM193AP78312 1265 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 DR1Q01658 176 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 ZNF252P-AS1Q0IIN9 211 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 UBXN11Q5T124 520 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 DUPD1Q68J44 220 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 ERICH1Q86X53 443 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 KATNAL2Q8IYT4 538 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 LRRC52Q8N7C0 313 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 NIPA2Q8N8Q9 360 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 CYTH4Q9UIA0 394 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 STRIP2Q9ULQ0 834 aa21.17■□□□□ 0.98
NELFE-211ENST00000492185 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.17■□□□□ 0.98
NELFE-211ENST00000492185 SYF2O95926 243 aaKnown RBP21.16■□□□□ 0.98
NELFE-211ENST00000492185 RARAP10276 462 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 VDRP11473 427 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 CD19P15391 556 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 RPL7AP62424 266 aaKnown RBP21.16■□□□□ 0.98
NELFE-211ENST00000492185 CNGA2Q16280 664 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 PTPN20Q4JDL3 420 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 ALS2CLQ60I27 953 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 TAF2Q6P1X5 1199 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 DNAJC24Q6P3W2 148 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 ADAT2Q7Z6V5 191 aaKnown RBP21.16■□□□□ 0.98
NELFE-211ENST00000492185 RHOT1Q8IXI2 618 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 TRIB2Q92519 343 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 RUNDC3BQ96NL0 473 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 RAB17Q9H0T7 212 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 LRRC19Q9H756 370 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 FAM114A2Q9NRY5 505 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 MTUS1Q9ULD2 1270 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 KIAA1257Q9ULG3 409 aa21.16■□□□□ 0.98
NELFE-211ENST00000492185 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.16■□□□□ 0.98
NELFE-211ENST00000492185 O00370 1275 aa21.15■□□□□ 0.98
NELFE-211ENST00000492185 RECQL4O94761 1208 aa21.15■□□□□ 0.98
NELFE-211ENST00000492185 GJB6O95452 261 aa21.15■□□□□ 0.98
NELFE-211ENST00000492185 HMGCRP04035 888 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms