RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 USP37Q86T82 979 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 PKMYT1Q99640 499 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 OXCT2Q9BYC2 517 aaPredicted RBP16.32■□□□□ 0.2
SS18L1-204ENST00000491916 PRKD2Q9BZL6 878 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 AFF4Q9UHB7 1163 aaKnown RBP16.32■□□□□ 0.2
SS18L1-204ENST00000491916 DSEQ9UL01 958 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 CTNND2Q9UQB3 1225 aa16.32■□□□□ 0.2
SS18L1-204ENST00000491916 ARHGEF37A1IGU5 675 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 SLC16A3O15427 465 aaKnown RBP16.31■□□□□ 0.2
SS18L1-204ENST00000491916 C8AP07357 584 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 HOXA9P31269 272 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 STX17P56962 302 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 GPR17Q13304 367 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 STIM1Q13586 685 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 NCOA4Q13772 614 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 DPH6Q7L8W6 267 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 TCEAL8Q8IYN2 117 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
SS18L1-204ENST00000491916 TSG101Q99816 390 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 PHF7Q9BWX1 381 aaPredicted RBP16.31■□□□□ 0.2
SS18L1-204ENST00000491916 TMLHEQ9NVH6 421 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 PRKAG3Q9UGI9 489 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 DPP7Q9UHL4 492 aa16.31■□□□□ 0.2
SS18L1-204ENST00000491916 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 POU2F2P09086 479 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
SS18L1-204ENST00000491916 ATICP31939 592 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 GCLMP48507 274 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 ADCY1Q08828 1119 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 PAK1Q13153 545 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 CES5AQ6NT32 575 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 ATAD1Q8NBU5 361 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 CEP63Q96MT8 703 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 MAFFQ9ULX9 164 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 FAM50BQ9Y247 325 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 DOCK8Q8NF50 2099 aa16.3■□□□□ 0.2
SS18L1-204ENST00000491916 MTMR11A4FU01 709 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 HUS1O60921 280 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 N4BP1O75113 896 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 ASS1P00966 412 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 HLA-DRAP01903 254 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 EPB41P11171 864 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 LMO2P25791 158 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 GTF2H1P32780 548 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 MTHFRP42898 656 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 CDR1P51861 262 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 BIRC3Q13489 604 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 ATAT1Q5SQI0 421 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 METTL23Q86XA0 190 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 IRF2BP1Q8IU81 584 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 ADGRF2Q8IZF7 708 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 TAS1R2Q8TE23 839 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 SMG7Q92540 1137 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 SLC35C1Q96A29 364 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 PGLYRP2Q96PD5 576 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 ACBD6Q9BR61 282 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 SDCBP2Q9H190 292 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
SS18L1-204ENST00000491916 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
SS18L1-204ENST00000491916 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 GOLGA6L22H0YM25 854 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 NRG2O14511 850 aaPredicted RBP16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CCL16O15467 120 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 PHACTR2O75167 634 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 TACC1O75410 805 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 KRT13P13646 458 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CPB1P15086 417 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 ACAT1P24752 427 aaKnown RBP16.28■□□□□ 0.2
SS18L1-204ENST00000491916 NLRP12P59046 1061 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 DUSP4Q13115 394 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 TRPC3Q13507 836 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 SLC39A12Q504Y0 691 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms