RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 ZNF516Q92618 1163 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 SPATA32Q96LK8 384 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 GZF1Q9H116 711 aaPredicted RBP9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 AGPAT3Q9NRZ7 376 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 FBXL21Q9UKT6 434 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 CA14Q9ULX7 337 aa9.61□□□□□ -0.87
COL6A4P1-203ENST00000491915 FAM237AA0A1B0GTK4 181 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 SRFP11831 508 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 ODC1P11926 461 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 PAX3P23760 479 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 CYP2J2P51589 502 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 NDUFA8P51970 172 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 RBP5P82980 135 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 TEAD2Q15562 447 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 SLC39A12Q504Y0 691 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 TMC8Q8IU68 726 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 PLEKHO2Q8TD55 490 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 OXCT2Q9BYC2 517 aaPredicted RBP9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 MTMR12Q9C0I1 747 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 KCNH6Q9H252 994 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 ZNF334Q9HCZ1 680 aaPredicted RBP9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 L1RE1Q9UN81 338 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 YIPF1Q9Y548 306 aa9.6□□□□□ -0.87
COL6A4P1-203ENST00000491915 SHISA7A6NL88 538 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 H0Y858 1186 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 KIAA0391O15091 583 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 ATP2C2O75185 946 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 MICAL2O94851 1124 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 KRT19P08727 400 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 FCARP24071 287 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 ACAT1P24752 427 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 LMO2P25791 158 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 HOXD11P31277 338 aaPredicted RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 VIPR2P41587 438 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 GPR15P49685 360 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 KRT85P78386 507 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 BFSP1Q12934 665 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 SNW1Q13573 536 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 KNOP1Q1ED39 458 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 DUOXA2Q1HG44 320 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 SOWAHAQ2M3V2 549 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 SV2CQ496J9 727 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 SLC44A4Q53GD3 710 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 CYP4A22Q5TCH4 519 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 IQCEQ6IPM2 695 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 STXBP4Q6ZWJ1 553 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 GAREM2Q75VX8 874 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 LIMS2Q7Z4I7 341 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 HOMEZQ8IX15 550 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 KIAA0895Q8NCT3 520 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 GIPC2Q8TF65 315 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 CCDC127Q96BQ5 260 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 RSPRY1Q96DX4 576 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 LRRC3BQ96PB8 259 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 PKMYT1Q99640 499 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 LPIN3Q9BQK8 851 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 MFSD1Q9H3U5 465 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 MAGEF1Q9HAY2 307 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 FAM86C1Q9NVL1 165 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 GDAP2Q9NXN4 497 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 DSEQ9UL01 958 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 MTF2Q9Y483 593 aaPredicted RBP9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 NME7Q9Y5B8 376 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
COL6A4P1-203ENST00000491915 NCANO14594 1321 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 A0A1W2PRU2 124 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 MYBPHLA2RUH7 354 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 STK25O00506 426 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 ZNF197O14709 1029 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 GABRDO14764 452 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 LRRN2O75325 713 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 ECI2O75521 394 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 HAPLN1P10915 354 aaPredicted RBP9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 ATF6P18850 670 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 AOC1P19801 751 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 CD72P21854 359 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 SYKP43405 635 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 ALDH1A3P47895 512 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 CASP4P49662 377 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 EPHB3P54753 998 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 CYP24A1Q07973 514 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 PSMD6Q15008 389 aa9.58□□□□□ -0.88
COL6A4P1-203ENST00000491915 SNRNP35Q16560 246 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms