RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 GHRHRQ02643 423 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CAPSQ13938 189 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TAF12Q16514 161 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 PRRT2Q7Z6L0 340 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 VSIG1Q86XK7 387 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 C3orf20Q8ND61 904 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF606Q8WXB4 792 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ACO2Q99798 780 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TUT1Q9H6E5 874 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 DHX33Q9H6R0 707 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 WRAP73Q9P2S5 460 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 NPTXRO95502 500 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 PDGFRAP16234 1089 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 ADORA2AP29274 412 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 CDH6P55285 790 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 BCAR1P56945 870 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 FMO1Q01740 532 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 RNASELQ05823 741 aaKnown RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 PLCB4Q15147 1175 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 BBS9Q3SYG4 887 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 NLRP14Q86W24 1093 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 DDX42Q86XP3 938 aaKnown RBP eCLIP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 AFG1LQ8WV93 481 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 TMBIM4Q9HC24 238 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 H3BQF6 201 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 MT-ND3P03897 115 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SETSIPP0DME0 302 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 RARGP13631 454 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SSTR3P32745 418 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 IFRD2Q12894 506 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SEZ6Q53EL9 994 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SMYD5Q6GMV2 418 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SPOPLQ6IQ16 392 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 DAW1Q8N136 415 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 TMEM176AQ96HP8 235 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 MAD1L1Q9Y6D9 718 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SNCAIPQ9Y6H5 919 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 DDX60LQ5H9U9 1706 aaKnown RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 A0A087WZ62 844 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 A0A0B4J269 797 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 C17orf102A2RUQ5 167 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 UNCXA6NJT0 531 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 LGALS2P05162 132 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 EIF3EP60228 445 aaKnown RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SREBF2Q12772 1141 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF268Q14587 947 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 GRIK4Q16099 956 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 P3H1Q32P28 736 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 Q3C1V9 767 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 BOLA3Q53S33 107 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 BTBD6Q96KE9 485 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 FRMD8Q9BZ67 464 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 COQ4Q9Y3A0 265 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 KCNA3P22001 575 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 ACAP1Q15027 740 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 TDRD10Q5VZ19 366 aaKnown RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 PHF13Q86YI8 300 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 ZBTB45Q96K62 511 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-208ENST00000490993 SEPT10Q9P0V9 454 aa7.74□□□□□ -1.17
NPHP3-208ENST00000490993 H3BRJ5 948 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 CDH16O75309 829 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 TFRCP02786 760 aaKnown RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 FGFR4P22455 802 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 HOXD10P28358 340 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 DRG2P55039 364 aaKnown RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 COG7P83436 770 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 ATP11AP98196 1134 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 IFT88Q13099 833 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 SPARCL1Q14515 664 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 TFDP3Q5H9I0 405 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 CFAP157Q5JU67 520 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 KATNAL2Q8IYT4 538 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 GBP7Q8N8V2 638 aaPredicted RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 LRRC57Q8N9N7 239 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 GIMAP7Q8NHV1 300 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 HDAC7Q8WUI4 952 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 RIN2Q8WYP3 895 aaPredicted RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 SERPINB12Q96P63 405 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 RAB3IPQ96QF0 476 aaPredicted RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 GPR20Q99678 358 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 FAM124BQ9H5Z6 455 aaPredicted RBP7.73□□□□□ -1.17
NPHP3-208ENST00000490993 DONSONQ9NYP3 566 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 TAS2R14Q9NYV8 317 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 PCYOX1Q9UHG3 505 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 ZMYM2Q9UBW7 1377 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 DLEC1Q9Y238 1755 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 PI4K2BG5E9Z4 385 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 STAMBPO95630 424 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 IFNAR2P48551 515 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 TAF6P49848 677 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 ITGA8P53708 1063 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 HIF1AQ16665 826 aa7.73□□□□□ -1.17
NPHP3-208ENST00000490993 GOLGA7BQ2TAP0 167 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms