RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MEN1O00255 615 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 B4GALT5O43286 388 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 CALUO43852 315 aaPredicted RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 IL2RAP01589 272 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 NR3C1P04150 777 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 ARF4P18085 180 aaPredicted RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 AKAP5P24588 427 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 KLRC2P26717 231 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 AXLP30530 894 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 OR1G1P47890 313 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 SMTNP53814 917 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 ITIH3Q06033 890 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 TLR1Q15399 786 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 PTPN14Q15678 1187 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 NFIL3Q16649 462 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 ATAT1Q5SQI0 421 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 RARS2Q5T160 578 aaKnown RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 NOTUMQ6P988 496 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 TAS1R1Q7RTX1 841 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 FILIP1Q7Z7B0 1213 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 FAM114A1Q8IWE2 563 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 SPC24Q8NBT2 197 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 FEZF2Q8TBJ5 459 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 SLC22A17Q8WUG5 538 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 KCNN1Q92952 543 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 HVCN1Q96D96 273 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 IFT74Q96LB3 600 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 CNOT6LQ96LI5 555 aaKnown RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 FBXL18Q96ME1 805 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 KLHL5Q96PQ7 755 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 ACCSQ96QU6 501 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 POMKQ9H5K3 350 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 UBN1Q9NPG3 1134 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 KMT5AQ9NQR1 393 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 ARHGAP28Q9P2N2 729 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 MAGEC2Q9UBF1 373 aaPredicted RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 PRG3Q9Y2Y8 225 aaPredicted RBP8.2□□□□□ -1.1
CLDN1-202ENST00000490800 TRIOO75962 3097 aa8.2□□□□□ -1.1
CLDN1-202ENST00000490800 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 A0A1W2PRU2 124 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 LRRIQ4A6NIV6 560 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 C2CD2LO14523 706 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 CETN3O15182 167 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 CLIC2O15247 247 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TEX33O43247 280 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NPTXRO95502 500 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 CNPP09543 421 aaKnown RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NR2F2P24468 414 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 WEE1P30291 646 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 PBX1P40424 430 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MLH1P40692 756 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MTHFRP42898 656 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NAMPTP43490 491 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MTIF2P46199 727 aaKnown RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 SCNN1GP51170 649 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 ADAM9Q13443 819 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 PPP2R5AQ15172 486 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 PTPN21Q16825 1174 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 FILIP1LQ4L180 1135 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TMC5Q6UXY8 1006 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 Q6ZVU0 165 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 HS2ST1Q7LGA3 356 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 BMP8AQ7Z5Y6 402 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 PPFIBP1Q86W92 1011 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 CREBRFQ8IUR6 639 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 VSTM4Q8IW00 320 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 DRC7Q8IY82 874 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 SYCP3Q8IZU3 236 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 GSTCDQ8NEC7 633 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 ANKRD20A12PQ8NF67 263 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 GOLGA5Q8TBA6 731 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 CCDC51Q96ER9 411 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TUBGCP2Q9BSJ2 902 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 EMILIN2Q9BXX0 1053 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NFKBIZQ9BYH8 718 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TSPAN10Q9H1Z9 355 aaPredicted RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 VPS16Q9H269 839 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 NXF3Q9H4D5 531 aaKnown RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TMEM206Q9H813 350 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MRPL17Q9NRX2 175 aaKnown RBP8.19□□□□□ -1.1
CLDN1-202ENST00000490800 AGPAT3Q9NRZ7 376 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 DMAC2Q9NW81 257 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 MARCH5Q9NX47 278 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 KLK14Q9P0G3 267 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 KCNG1Q9UIX4 513 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 TBX20Q9UMR3 447 aa8.19□□□□□ -1.1
CLDN1-202ENST00000490800 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms