RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 FAM228BP0C875 321 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 MYBP10242 640 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 AKR1A1P14550 325 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SLC9A1P19634 815 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 KLRC1P26715 233 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 HOXA13P31271 388 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 GBP1P32455 592 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 ICAM3P32942 547 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 HOXD13P35453 343 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SOX5P35711 763 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 QARSP47897 775 aaKnown RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 FMO5P49326 533 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 HSD17B4P51659 736 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SMTNP53814 917 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 JAM2P57087 298 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SHC2P98077 582 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 LMNB2Q03252 620 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 CUL1Q13616 776 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 CTTNQ14247 550 aaKnown RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 TTLL4Q14679 1199 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 EFHC2Q5JST6 749 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 ODR4Q5SWX8 454 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 PCNX4Q63HM2 1172 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 DPY19L2P1Q6NXN4 242 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 B3GNT9Q6UX72 402 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 OTUD6AQ7L8S5 288 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 ZNF571Q7Z3V5 609 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SLFN11Q7Z7L1 901 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 NLRX1Q86UT6 975 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 CD302Q8IX05 232 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 RHOT2Q8IXI1 618 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 PGBD3Q8N328 593 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 MREGQ8N565 214 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 TMEM105Q8N8V8 129 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 FAM133AQ8N9E0 248 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 BANK1Q8NDB2 785 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 GLIS3Q8NEA6 775 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 FAM76AQ8TAV0 307 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 GJA10Q969M2 543 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 LRRC45Q96CN5 670 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 CCDC43Q96MW1 224 aaKnown RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 LRRC1Q9BTT6 524 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 STRA6Q9BX79 667 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 SLITRK6Q9H5Y7 841 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 NSUN3Q9H649 340 aaKnown RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 C17orf75Q9HAS0 396 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 GDF3Q9NR23 364 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 DNAAF2Q9NVR5 837 aaKnown RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 RGL1Q9NZL6 768 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 AMFRQ9UKV5 643 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 TTC7AQ9ULT0 858 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-213ENST00000490332 HPCAL4Q9UM19 191 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 UBIAD1Q9Y5Z9 338 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 CAPN6Q9Y6Q1 641 aa5.44□□□□□ -1.54
PTPRK-213ENST00000490332 COL4A3Q01955 1670 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 IGF2RP11717 2491 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 FANCMQ8IYD8 2048 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 ANKRD62A6NC57 917 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 LRRIQ3A6PVS8 624 aaPredicted RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 MIF4GDA9UHW6 222 aaKnown RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 C19orf81C9J6K1 198 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 H3BQF6 201 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 PGRMC1O00264 195 aaKnown RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CLIC2O15247 247 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 BUB1O43683 1085 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 BAIAP3O94812 1187 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 ERLIN2O94905 339 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 TMEM253P0C7T8 217 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 PLS3P13797 630 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CST5P28325 142 aaPredicted RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 GTF2H1P32780 548 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 RFC2P35250 354 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 MATR3P43243 847 aaKnown RBP eCLIP5.43□□□□□ -1.541e-6■■■■□ 20
PTPRK-213ENST00000490332 LMAN1P49257 510 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CLCN5P51795 746 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 HADHBP55084 474 aaKnown RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CCL23P55773 120 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 BACE1P56817 501 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 SNAP25P60880 206 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 PSMC5P62195 406 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CYP4A11Q02928 519 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 ARID5AQ03989 594 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 C2orf54Q08AI8 447 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 RAD51AP2Q09MP3 1159 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 RRP1BQ14684 758 aaKnown RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 TKFCQ3LXA3 575 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 DCAF17Q5H9S7 520 aaPredicted RBP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 SPDYCQ5MJ68 293 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CFAP58Q5T655 872 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 NFRKBQ6P4R8 1299 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 LRIG3Q6UXM1 1119 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 SND1Q7KZF4 910 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRK-213ENST00000490332 PEX26Q7Z412 305 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 CROCCP2Q86T23 111 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 RPAINQ86UA6 219 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 C4orf19Q8IY42 314 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 EFCAB13Q8IY85 973 aa5.43□□□□□ -1.54
PTPRK-213ENST00000490332 SPICE1Q8N0Z3 855 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms