RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 VN1R2Q8NFZ6 395 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 LMO3Q8TAP4 145 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 CASP10Q92851 521 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 ACBD6Q9BR61 282 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 RHOBTB2Q9BYZ6 727 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 PLEKHA4Q9H4M7 779 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 CYP3A43Q9HB55 503 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 APOBEC3GQ9HC16 384 aaKnown RBP18.7■□□□□ 0.58
ERCC3-207ENST00000490062 FANCLQ9NW38 375 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 COG5Q9UP83 839 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 CDY1Q9Y6F8 540 aa18.7■□□□□ 0.58
ERCC3-207ENST00000490062 SMTNL1A8MU46 457 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 TULP1O00294 542 aaPredicted RBP18.69■□□□□ 0.58
ERCC3-207ENST00000490062 ADAM12O43184 909 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 GLUD1P00367 558 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 SRGAP2BP0DMP2 458 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 RPL17P18621 184 aaKnown RBP18.69■□□□□ 0.58
ERCC3-207ENST00000490062 OR1D2P34982 312 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 GTF2F1P35269 517 aaKnown RBP eCLIP18.69■□□□□ 0.58
ERCC3-207ENST00000490062 LTBRP36941 435 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 ASPAP45381 313 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 MYL7Q01449 175 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 ROR1Q01973 937 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 GPR17Q13304 367 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 MIIPQ5JXC2 388 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 RBM23Q86U06 439 aaKnown RBP18.69■□□□□ 0.58
ERCC3-207ENST00000490062 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
ERCC3-207ENST00000490062 THEM5Q8N1Q8 247 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 CCDC150Q8NCX0 1101 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 ZNF461Q8TAF7 563 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 TUBGCP2Q9BSJ2 902 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 NIF3L1Q9GZT8 377 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 ZCWPW1Q9H0M4 648 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 DZANK1Q9NVP4 752 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 HSFX1Q9UBD0 423 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 FBXW11Q9UKB1 542 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 PLXNA3P51805 1871 aa18.69■□□□□ 0.58
ERCC3-207ENST00000490062 TGM5O43548 720 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 CSPG5O95196 566 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 HOXB8P17481 243 aaPredicted RBP18.68■□□□□ 0.58
ERCC3-207ENST00000490062 PCSK1P29120 753 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 MTIF2P46199 727 aaKnown RBP18.68■□□□□ 0.58
ERCC3-207ENST00000490062 ZNF445P59923 1031 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 INCA1Q0VD86 236 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 MICALL1Q8N3F8 863 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 TTC39CQ8N584 583 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 OR10T2Q8NGX3 314 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 MSLNLQ96KJ4 702 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 PKMYT1Q99640 499 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 MMRN2Q9H8L6 949 aa18.68■□□□□ 0.58
ERCC3-207ENST00000490062 LIMA1Q9UHB6 759 aaKnown RBP18.68■□□□□ 0.58
ERCC3-207ENST00000490062 AFF4Q9UHB7 1163 aaKnown RBP18.68■□□□□ 0.58
ERCC3-207ENST00000490062 REV3LO60673 3130 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 WDR27A2RRH5 827 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 POU2F2P09086 479 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 ATF2P15336 505 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 HOXA9P31269 272 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 CA8P35219 290 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 VWA3BQ502W6 1294 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 WDR44Q5JSH3 913 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 ELMSAN1Q6PJG2 1045 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 LRSAM1Q6UWE0 723 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 OSTM1Q86WC4 334 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 AOPEPQ8N6M6 819 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 CMASQ8NFW8 434 aaPredicted RBP18.67■□□□□ 0.58
ERCC3-207ENST00000490062 C2orf15Q8WU43 125 aaKnown RBP18.67■□□□□ 0.58
ERCC3-207ENST00000490062 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 PI4K2AQ9BTU6 479 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 NDST4Q9H3R1 872 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
ERCC3-207ENST00000490062 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
ERCC3-207ENST00000490062 CLEC1BQ9P126 229 aa18.67■□□□□ 0.58
ERCC3-207ENST00000490062 NXF1Q9UBU9 619 aaKnown RBP18.67■□□□□ 0.58
ERCC3-207ENST00000490062 LINC01565O15544 149 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 LRRN2O75325 713 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 TBX10O75333 385 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 EPCAMP16422 314 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
ERCC3-207ENST00000490062 INTS6LQ5JSJ4 861 aaKnown RBP18.66■□□□□ 0.58
ERCC3-207ENST00000490062 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 ANKRD54Q6NXT1 300 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 FAM171BQ6P995 826 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 APTXQ7Z2E3 356 aaKnown RBP18.66■□□□□ 0.58
ERCC3-207ENST00000490062 UNC93AQ86WB7 457 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 TCEAL8Q8IYN2 117 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 EHBP1Q8NDI1 1231 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 HLA-CQ95604 372 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 MRPL45Q9BRJ2 306 aaKnown RBP18.66■□□□□ 0.58
ERCC3-207ENST00000490062 SDCBP2Q9H190 292 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 CDH9Q9ULB4 789 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 POLIQ9UNA4 740 aa18.66■□□□□ 0.58
ERCC3-207ENST00000490062 TBXAS1P24557 533 aaPredicted RBP18.65■□□□□ 0.58
ERCC3-207ENST00000490062 GCNT1Q02742 428 aa18.65■□□□□ 0.58
ERCC3-207ENST00000490062 KRT31Q15323 416 aa18.65■□□□□ 0.58
ERCC3-207ENST00000490062 DCP1BQ8IZD4 617 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms