RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 PLEKHG4BQ96PX9 1271 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 STRBPQ96SI9 672 aaKnown RBP4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 SLC46A2Q9BY10 475 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 DPH1Q9BZG8 443 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 UNKQ9C0B0 810 aaKnown RBP4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF518BQ9C0D4 1074 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF768Q9H5H4 540 aaKnown RBP4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 PNPLA8Q9NP80 782 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 STK32BQ9NY57 414 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 HSFX1Q9UBD0 423 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 XPR1Q9UBH6 696 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 MAP3K2Q9Y2U5 619 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 TSC22D4Q9Y3Q8 395 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 CHST2Q9Y4C5 530 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 PAXBP1Q9Y5B6 917 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
AC055855.1-201ENST00000489563 CECR2Q9BXF3 1484 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 GAGE12BA1L429 117 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 CCDC78A2IDD5 438 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 GAGE12HA6NDE8 117 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 POM121BA6NF01 834 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 TOR1BO14657 336 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 PLSCR1O15162 318 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 NCR1O76036 304 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 IL18RAPO95256 599 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 NDUFA10O95299 355 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 CFIP05156 583 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 ELANEP08246 267 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF20P17024 532 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 RPS16P62249 146 aaKnown RBP4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 ADAM17P78536 824 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 FAM189BP81408 668 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 FPGSQ05932 587 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 TMEM132CQ8N3T6 1108 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF276Q8N554 614 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 MAML1Q92585 1016 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 NMD3Q96D46 503 aaKnown RBP4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 RNF31Q96EP0 1072 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 MOGAT1Q96PD6 335 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 RPS6KC1Q96S38 1066 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 C1QTNF3Q9BXJ4 246 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 STK31Q9BXU1 1019 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 TTYH3Q9C0H2 523 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 AKIP1Q9NQ31 210 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 A1CFQ9NQ94 594 aaKnown RBP4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 COL20A1Q9P218 1284 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 NEU2Q9Y3R4 380 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 RAD54BQ9Y620 910 aa4.3□□□□□ -1.72
AC055855.1-201ENST00000489563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 TRIM43BA6NCK2 446 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 TMEM233B4DJY2 109 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 F8W8V4 182 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 RASSF9O75901 435 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PARP1P09874 1014 aaKnown RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 XRCC6P12956 609 aaKnown RBP eCLIP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 KCNA2P16389 499 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 CHRM3P20309 590 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 FDXRP22570 491 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 STT3AP46977 705 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ALDH5A1P51649 535 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 CASP5P51878 434 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 SATB1Q01826 763 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF543Q08ER8 600 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 RESTQ13127 1097 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 DAG1Q14118 895 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 IQCB1Q15051 598 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 CDSNQ15517 529 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 LONRF3Q496Y0 759 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 LAYNQ6UX15 382 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PPP1R32Q7Z5V6 425 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PRRT2Q7Z6L0 340 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 CLNKQ7Z7G1 428 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 MORC1Q86VD1 984 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 LIX1LQ8IVB5 337 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 CCDC33Q8N5R6 958 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PSD4Q8NDX1 1056 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 POC1BQ8TC44 478 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF483Q8TF39 744 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 SLC25A43Q8WUT9 341 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 RAPGEF4Q8WZA2 1011 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 PMM1Q92871 262 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 GJA10Q969M2 543 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 TRIM43Q96BQ3 446 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 LRIG1Q96JA1 1093 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 MSLNLQ96KJ4 702 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 SLC46A1Q96NT5 459 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 SPATA5L1Q9BVQ7 753 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ALOXE3Q9BYJ1 711 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 MS4A7Q9GZW8 240 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ZNF703Q9H7S9 590 aaPredicted RBP4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 ZSCAN32Q9NX65 697 aa4.29□□□□□ -1.72
AC055855.1-201ENST00000489563 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms