RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 FAM13AO94988 1023 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 CYP11A1P05108 521 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 CHRNB1P11230 501 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 ATF6P18850 670 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
ACTN4-206ENST00000489451 ADSSP30520 456 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 ACOT2P49753 483 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 MYBPC2Q14324 1141 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 PTPAQ15257 358 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
ACTN4-206ENST00000489451 PPM1JQ5JR12 505 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 OVOS1Q6IE37 1185 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 TXNDC11Q6PKC3 985 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 DSTYKQ6XUX3 929 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 EFCAB13Q8IY85 973 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 LEMD2Q8NC56 503 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 ZSWIM2Q8NEG5 633 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 FAM3CQ92520 227 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 IRF7Q92985 503 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 EPSTI1Q96J88 318 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 STRA6Q9BX79 667 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 IL21Q9HBE4 155 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 C2orf42Q9NWW7 574 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 PRAMEF12O95522 483 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 CCNE1P24864 410 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 UBA7P41226 1012 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 SOX9P48436 509 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 KCNA1Q09470 495 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 DNAJB7Q7Z6W7 309 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 PSMG2Q969U7 264 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 CALML4Q96GE6 196 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 ZFYVE19Q96K21 471 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 LPIN3Q9BQK8 851 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 OXCT2Q9BYC2 517 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 CCSER1Q9C0I3 900 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 SMG5Q9UPR3 1016 aaKnown RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
ACTN4-206ENST00000489451 SETXQ7Z333 2677 aaKnown RBP12.74□□□□□ -0.37
ACTN4-206ENST00000489451 MAN2B1O00754 1011 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 ZNF263O14978 683 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 NCAM2O15394 837 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 ODC1P11926 461 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 LONP1P36776 959 aaKnown RBP12.73□□□□□ -0.37
ACTN4-206ENST00000489451 CYP4F8P98187 520 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 SATB1Q01826 763 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 KYAT1Q16773 422 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 LARP1BQ659C4 914 aaKnown RBP12.73□□□□□ -0.37
ACTN4-206ENST00000489451 USP37Q86T82 979 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 SFR1Q86XK3 245 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
ACTN4-206ENST00000489451 RIN3Q8TB24 985 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 SECISBP2LQ93073 1101 aaKnown RBP12.73□□□□□ -0.37
ACTN4-206ENST00000489451 CHFRQ96EP1 664 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 TSPAN18Q96SJ8 248 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 FGFBP2Q9BYJ0 223 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 LMAN1LQ9HAT1 526 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 TMLHEQ9NVH6 421 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
ACTN4-206ENST00000489451 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 DERAQ9Y315 318 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 C2CD2Q9Y426 696 aa12.73□□□□□ -0.37
ACTN4-206ENST00000489451 SLC38A8A6NNN8 435 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 CHADO15335 359 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
ACTN4-206ENST00000489451 GABRR2P28476 465 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 DDIT3P35638 169 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 CASP5P51878 434 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 EPHB3P54753 998 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 PLD1Q13393 1074 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 CUL4AQ13619 759 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 SLC39A12Q504Y0 691 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 WSCD1Q658N2 575 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 Q6ZS52 159 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 ZNF720Q7Z2F6 126 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 CD302Q8IX05 232 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 CXorf38Q8TB03 319 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
ACTN4-206ENST00000489451 GPR88Q9GZN0 384 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms