RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF627Q7L945 461 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 GPRIN1Q7Z2K8 1008 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 SESTD1Q86VW0 696 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 PPP1R3BQ86XI6 285 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 FAM90A1Q86YD7 464 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 LIX1LQ8IVB5 337 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 SMAP1Q8IYB5 467 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 FAM9AQ8IZU1 332 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 CPXCR1Q8N123 301 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 MB21D1Q8N884 522 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 RNF152Q8N8N0 203 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 LSM14BQ9BX40 385 aaKnown RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 UNKQ9C0B0 810 aaKnown RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 C11orf54Q9H0W9 315 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 WDCPQ9H6R7 721 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 SARS2Q9NP81 518 aaKnown RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 STK32BQ9NY57 414 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 PADI4Q9UM07 663 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 F2RL2O00254 374 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 FGF18O76093 207 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 IL18RAPO95256 599 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 FTH1P19P0C7X4 201 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 ALAS1P13196 640 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 BRAFP15056 766 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 PRDX5P30044 214 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 PTGS2P35354 604 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 CHKAP35790 457 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 PPM1FP49593 454 aaPredicted RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 RAP2BP61225 183 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 DAG1Q14118 895 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 PABPC1LQ4VXU2 614 aaKnown RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 KHDC1LQ5JSQ8 128 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 DRICH1Q6PGQ1 229 aaPredicted RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 PCSK4Q6UW60 755 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 ULK2Q8IYT8 1036 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 OR10H5Q8NGA6 315 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 SLC35B2Q8TB61 432 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 BRI3BPQ8WY22 251 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 ZC3H10Q96K80 434 aaKnown RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 MSLNLQ96KJ4 702 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 MNTQ99583 582 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 MRPL46Q9H2W6 279 aaKnown RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 RUVBL1Q9Y265 456 aaKnown RBP5.21□□□□□ -1.58
XRN1-213ENST00000489241 PCDHGB2Q9Y5G2 931 aa5.21□□□□□ -1.58
XRN1-213ENST00000489241 A0A087WV62 115 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 KIAA0391O15091 583 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 NPHP1O15259 732 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 WDHD1O75717 1129 aaPredicted RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 AHSGP02765 367 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 EN2P19622 333 aaPredicted RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 ARFIP2P53365 341 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 POU5F1BQ06416 359 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 DACT2Q5SW24 774 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 KLHDC7AQ5VTJ3 777 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 NAIF1Q69YI7 327 aaPredicted RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 CCDC33Q8N5R6 958 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 AOPEPQ8N6M6 819 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 DCBLD1Q8N8Z6 715 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 OR52N2Q8NGI0 321 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 BRIX1Q8TDN6 353 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 SCLT1Q96NL6 688 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 P2RX7Q99572 595 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 COLEC11Q9BWP8 271 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 REXO4Q9GZR2 422 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 NRDE2Q9H7Z3 1164 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 PNPLA8Q9NP80 782 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 CASS4Q9NQ75 786 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 CNNM1Q9NRU3 951 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 PIH1D1Q9NWS0 290 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 SIDT1Q9NXL6 827 aaKnown RBP5.2□□□□□ -1.58
XRN1-213ENST00000489241 PCDHGB3Q9Y5G1 929 aa5.2□□□□□ -1.58
XRN1-213ENST00000489241 APOL1O14791 398 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 RAMP2O60895 175 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 RPS6KA4O75676 772 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 PARP1P09874 1014 aaKnown RBP5.19□□□□□ -1.58
XRN1-213ENST00000489241 HDCP19113 662 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 MAPK10P53779 464 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 HTRA4P83105 476 aaPredicted RBP5.19□□□□□ -1.58
XRN1-213ENST00000489241 PDCD2Q16342 344 aaPredicted RBP5.19□□□□□ -1.58
XRN1-213ENST00000489241 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 C1QL3Q5VWW1 255 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 Q6ZPA2 131 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 ZNF354CQ86Y25 554 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 IL17RDQ8NFM7 739 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 SLC25A43Q8WUT9 341 aaPredicted RBP5.19□□□□□ -1.58
XRN1-213ENST00000489241 KBTBD7Q8WVZ9 684 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 SUCLG2Q96I99 432 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 DCLRE1CQ96SD1 692 aaKnown RBP5.19□□□□□ -1.58
XRN1-213ENST00000489241 AGAP2Q99490 1192 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 MYOCQ99972 504 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 TTLL2Q9BWV7 592 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 TRIM54Q9BYV2 358 aa5.19□□□□□ -1.58
XRN1-213ENST00000489241 COL20A1Q9P218 1284 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms