RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MMS19Q96T76 1030 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 IRF2BPLQ9H1B7 796 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SMOC2Q9H3U7 446 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ABI2Q9NYB9 513 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 CA14Q9ULX7 337 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SLC27A5Q9Y2P5 690 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ASB3Q9Y575 518 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SNX9Q9Y5X1 595 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 PIEZO1Q92508 2521 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 A0A1W2PQ27 194 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 A0A1W2PQ64 194 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 A0A1W2PQD8 194 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 MTMR11A4FU01 709 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 ACTN4O43707 911 aaKnown RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 NARSO43776 548 aaKnown RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 CALUO43852 315 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 TBC1D4O60343 1298 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 PAPLNO95428 1278 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 RPN1P04843 607 aaKnown RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 CYP11A1P05108 521 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 CEBPBP17676 345 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 TRIM21P19474 475 aaKnown RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 AVPR2P30518 371 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 LHX1P48742 406 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 NDUFA8P51970 172 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 LMBRD2Q68DH5 695 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 EPM2AIP1Q7L775 607 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 SPATA2LQ8IUW3 424 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 YAF2Q8IY57 180 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 ADGRF2Q8IZF7 708 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 ATAD1Q8NBU5 361 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 ST13P5Q8NFI4 369 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-232ENST00000489053 SCFD1Q8WVM8 642 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 KXD1Q9BQD3 176 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 RTP3Q9BQQ7 232 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 GPR88Q9GZN0 384 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 SNX25Q9H3E2 840 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 ARHGEF3Q9NR81 526 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 INTS13Q9NVM9 706 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 WNT16Q9UBV4 365 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 FRMD4BQ9Y2L6 1034 aa9.81□□□□□ -0.84
HDAC6-232ENST00000489053 CITO14578 2027 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ANHXE9PGG2 379 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 MICAL2O94851 1124 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 SMC2O95347 1197 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 PDGFBP01127 241 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-232ENST00000489053 NUBP1P53384 320 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 AP3M2P53677 418 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 RPL10AP62906 217 aaKnown RBP9.8□□□□□ -0.84
HDAC6-232ENST00000489053 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
HDAC6-232ENST00000489053 BMT2Q1RMZ1 405 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 CEP135Q66GS9 1140 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 CENPPQ6IPU0 288 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 PARM1Q6UWI2 310 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 TOP6BLQ8N6T0 577 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 CCDC150Q8NCX0 1101 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ZSWIM2Q8NEG5 633 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 SPPL2BQ8TCT7 592 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 FGF14Q92915 247 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 CGRRF1Q99675 332 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ZCWPW1Q9H0M4 648 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ATXN3LQ9H3M9 355 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 BRD9Q9H8M2 597 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ZFP14Q9HCL3 533 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 AVENQ9NQS1 362 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-232ENST00000489053 RMND1Q9NWS8 449 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
HDAC6-232ENST00000489053 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 ZDHHC9Q9Y397 364 aa9.8□□□□□ -0.84
HDAC6-232ENST00000489053 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 PDXKO00764 312 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 ECI2O75521 394 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SOAT2O75908 522 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 KRT13P13646 458 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 P4HA1P13674 534 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 RPL13P26373 211 aaKnown RBP9.79□□□□□ -0.84
HDAC6-232ENST00000489053 ANXA13P27216 316 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CDC25CP30307 473 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CLCN5P51795 746 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CDR1P51861 262 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 VCPP55072 806 aaKnown RBP9.79□□□□□ -0.84
HDAC6-232ENST00000489053 CYP24A1Q07973 514 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 PSMD6Q15008 389 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TEAD2Q15562 447 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 KRBA2Q6ZNG9 492 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 SCN4BQ8IWT1 228 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 PDCL2Q8N4E4 241 aa9.79□□□□□ -0.84
HDAC6-232ENST00000489053 OR5B17Q8NGF7 314 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms