RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SIM1P81133 766 aaPredicted RBP4.74□□□□□ -1.65
RFC4-213ENST00000489028 ZNF169Q14929 603 aaPredicted RBP4.74□□□□□ -1.65
RFC4-213ENST00000489028 PRR16Q569H4 304 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 TAF2Q6P1X5 1199 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 PPP1R32Q7Z5V6 425 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 COL23A1Q86Y22 540 aaPredicted RBP4.74□□□□□ -1.65
RFC4-213ENST00000489028 PSD4Q8NDX1 1056 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 C1GALT1C1Q96EU7 318 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 FAM167AQ96KS9 214 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 AIFM3Q96NN9 605 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 TAAR9Q96RI9 348 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 CAMKK2Q96RR4 588 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 SMOQ99835 787 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 ARMT1Q9H993 441 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.74□□□□□ -1.65
RFC4-213ENST00000489028 INTS13Q9NVM9 706 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 GABBR1Q9UBS5 961 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 E7ENX8 843 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 M0QYG6 137 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 OVOL3O00110 214 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 PROM1O43490 865 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 RFPL1O75677 317 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 DNAJB5O75953 348 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 SCGB1D2O95969 90 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 NUDT3O95989 172 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 CHEK2O96017 543 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 PPP3CBP16298 524 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 CXCR5P32302 372 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 TAP2Q03519 686 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 PREPLQ4J6C6 727 aaPredicted RBP4.73□□□□□ -1.65
RFC4-213ENST00000489028 CCDC157Q569K6 752 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 KIAA0895LQ68EN5 471 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 USP37Q86T82 979 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 SIMC1Q8NDZ2 872 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 KLHDC4Q8TBB5 520 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 MYCBPAPQ8TBZ2 947 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 SNX19Q92543 992 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 CDK5RAP3Q96JB5 506 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 PDLIM2Q96JY6 352 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 ACO2Q99798 780 aaKnown RBP4.73□□□□□ -1.65
RFC4-213ENST00000489028 CNPPD1Q9BV87 410 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 NMRK2Q9NPI5 230 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 STAP2Q9UGK3 403 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 ZNHIT2Q9UHR6 403 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 NOB1Q9ULX3 412 aaKnown RBP4.73□□□□□ -1.65
RFC4-213ENST00000489028 PCDHA6Q9UN73 950 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 NEU2Q9Y3R4 380 aa4.73□□□□□ -1.65
RFC4-213ENST00000489028 POLR2AP24928 1970 aaKnown RBP4.73□□□□□ -1.65
RFC4-213ENST00000489028 VWC2LB2RUY7 222 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 H3BML4 177 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 YY2O15391 372 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 UBXN7O94888 489 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 HSPA6P17066 643 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 HTR1BP28222 390 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 NPTX2P47972 431 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 SOX8P57073 446 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 RAB1AP62820 205 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 MRPS35P82673 323 aaKnown RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 HLXQ14774 488 aaPredicted RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 ZNF362Q5T0B9 420 aaPredicted RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 EMC10Q5UCC4 262 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 MICALCLQ6ZW33 695 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 DENND1CQ8IV53 801 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 FAM9AQ8IZU1 332 aaPredicted RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 PCSK9Q8NBP7 692 aaKnown RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 BRIX1Q8TDN6 353 aaKnown RBP4.72□□□□□ -1.65
RFC4-213ENST00000489028 ACTRT2Q8TDY3 377 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 NT5C1BQ96P26 610 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 R3HDMLQ9H3Y0 253 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 RSAD1Q9HA92 442 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 EID1Q9Y6B2 187 aa4.72□□□□□ -1.65
RFC4-213ENST00000489028 ZAR1LA6NP61 321 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 PEX1O43933 1283 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 S100BP04271 92 aaPredicted RBP4.71□□□□□ -1.66
RFC4-213ENST00000489028 ELFN1P0C7U0 828 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
RFC4-213ENST00000489028 FOLR3P41439 243 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 NDUFV1P49821 464 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 PRIMA1Q86XR5 153 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 DNAJC10Q8IXB1 793 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 CAMKK1Q8N5S9 505 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.66
RFC4-213ENST00000489028 FAM46DQ8NEK8 389 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 TOR1AIP2Q8NFQ8 470 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 TFAP2BQ92481 460 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 RUNDC1Q96C34 613 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 CPA4Q9UI42 421 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 DMTF1Q9Y222 760 aa4.71□□□□□ -1.66
RFC4-213ENST00000489028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 A0A0B4J269 797 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 WDR27A2RRH5 827 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 ADM5C9JUS6 153 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 DCLK1O15075 740 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 UNC5CO95185 931 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms