RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ADRB2P07550 413 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 PFKMP08237 780 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 NPR1P16066 1061 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 KRT15P19012 456 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 CREMQ03060 361 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 NOGQ13253 232 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 TUSC3Q13454 348 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 TRPC3Q13507 836 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 ADRM1Q16186 407 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 EMC4Q5J8M3 183 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 PRR31Q5SQ13 230 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 LMBRD2Q68DH5 695 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 KLHDC10Q6PID8 442 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 MIB1Q86YT6 1006 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 PHYKPLQ8IUZ5 450 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 TDRD7Q8NHU6 1098 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 OTUD7AQ8TE49 926 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 SEC14L1Q92503 715 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 HDAC10Q969S8 669 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 RILPL2Q969X0 211 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 NSUN4Q96CB9 384 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 RRP36Q96EU6 259 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 VMP1Q96GC9 406 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 RADILQ96JH8 1075 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 WRNIP1Q96S55 665 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 MPHOSPH8Q99549 860 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 KCNJ15Q99712 375 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 FAM167BQ9BTA0 163 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 MRPL9Q9BYD2 267 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 ACE2Q9BYF1 805 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 ARHGAP39Q9C0H5 1083 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 ARGLU1Q9NWB6 273 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 COL20A1Q9P218 1284 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 KIF17Q9P2E2 1029 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 TBC1D29Q9UFV1 150 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 RGS17Q9UGC6 210 aaPredicted RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 DPP7Q9UHL4 492 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 FEM1BQ9UK73 627 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 OGDHLQ9ULD0 1010 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 DENND2AQ9ULE3 1009 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 ISY1Q9ULR0 285 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 PCDHB1Q9Y5F3 818 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 SNX5Q9Y5X3 404 aa3.86□□□□□ -1.79
PRPF4-203ENST00000488937 TDRD9Q8NDG6 1382 aaKnown RBP3.86□□□□□ -1.79
PRPF4-203ENST00000488937 CCDC196A0A1B0GTZ2 297 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 FAM234BA2RU67 622 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PI4KAP2A4QPH2 592 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PABPN1LA6NDY0 278 aaKnown RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 B4DLN1 442 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PROB1E7EW31 1015 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 NKRFO15226 690 aaKnown RBP eCLIP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 TMEM127O75204 238 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 BAG2O95816 211 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 IGHDP01880 384 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 GNAT1P11488 350 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ALOX15P16050 662 aaPredicted RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ALOX12P18054 663 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 EN2P19622 333 aaPredicted RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 IL11P20809 199 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SCP2P22307 547 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 AOAHP28039 575 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CST5P28325 142 aaPredicted RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 HOXD13P35453 343 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 MCAMP43121 646 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SEC24CP53992 1094 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ITGA1P56199 1179 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 LGALS4P56470 323 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PLIN5Q00G26 463 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SPIRE1Q08AE8 756 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 FSTL1Q12841 308 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 MAPK7Q13164 816 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 IL10RAQ13651 578 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ERV3-1Q14264 604 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PLS1Q14651 629 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PLCB4Q15147 1175 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CD300LDQ6UXZ3 194 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 RNF207Q6ZRF8 634 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CATSPERGQ6ZRH7 1159 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 BBS12Q6ZW61 710 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 KANSL1Q7Z3B3 1105 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 LMNTD2Q8IXW0 634 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 FTSJ3Q8IY81 847 aaKnown RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 MSL3Q8N5Y2 521 aaKnown RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ZNF384Q8TF68 577 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 RSAD2Q8WXG1 361 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 KAT5Q92993 513 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 MUL1Q969V5 352 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SH3KBP1Q96B97 665 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 NMD3Q96D46 503 aaKnown RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 FAM167AQ96KS9 214 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 DMRTA2Q96SC8 542 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SDF4Q9BRK5 362 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 KATNAL1Q9BW62 490 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 JAM3Q9BX67 310 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 EIF2AQ9BY44 585 aaKnown RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 TXLNGYQ9BZA5 131 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SENP6Q9GZR1 1112 aaPredicted RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 EPB41L1Q9H4G0 881 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PRDM13Q9H4Q3 707 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms