RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 OSMP13725 252 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 SFPQP23246 707 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC93-209ENST00000488908 CCKARP32238 428 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 FAPQ12884 760 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 MIDNQ504T8 468 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 RSPH3Q86UC2 560 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 TMIEQ8NEW7 156 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 ADAMTS15Q8TE58 950 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 SREK1Q8WXA9 508 aaKnown RBP3.82□□□□□ -1.8
CCDC93-209ENST00000488908 LRIG1Q96JA1 1093 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 TMX3Q96JJ7 454 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 OSBPL9Q96SU4 736 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 ARHGEF3Q9NR81 526 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 MTMR4Q9NYA4 1195 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 PRR23D1E9PI22 279 aaPredicted RBP3.81□□□□□ -1.8
CCDC93-209ENST00000488908 SLC43A1O75387 559 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 DNAJB5O75953 348 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
CCDC93-209ENST00000488908 PRR23D2P0DMB1 279 aaPredicted RBP3.81□□□□□ -1.8
CCDC93-209ENST00000488908 GPR3P46089 330 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 MTNR1BP49286 362 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 NDUFV1P49821 464 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 STRN3Q13033 797 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 RABEP1Q15276 862 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 TRIP6Q15654 476 aaKnown RBP3.81□□□□□ -1.8
CCDC93-209ENST00000488908 TBCCQ15814 346 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 CNGA4Q8IV77 575 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 SLC17A8Q8NDX2 589 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 POC1BQ8TC44 478 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 FBXO41Q8TF61 875 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 ATRIPQ8WXE1 791 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 DPF2Q92785 391 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 ACTRT3Q9BYD9 372 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 CCM2LQ9NUG4 571 aaPredicted RBP3.81□□□□□ -1.8
CCDC93-209ENST00000488908 TDP1Q9NUW8 608 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 DKK3Q9UBP4 350 aa3.81□□□□□ -1.8
CCDC93-209ENST00000488908 CYP2D7A0A087X1C5 515 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 CCDC187A0A096LP49 1063 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 SMIM35A0A1B0GVV1 85 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 ANXA1P04083 346 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 PCSK6P29122 969 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 ARHGAP25P42331 645 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 ZNF134P52741 427 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 FLYWCH1Q4VC44 716 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 AARS2Q5JTZ9 985 aaKnown RBP3.8□□□□□ -1.8
CCDC93-209ENST00000488908 TEDDM1Q5T9Z0 273 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 ANKRD16Q6P6B7 361 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 CATSPERGQ6ZRH7 1159 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 MIGA2Q7L4E1 593 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 KIAA0907Q7Z7F0 614 aaPredicted RBP3.8□□□□□ -1.8
CCDC93-209ENST00000488908 GALNT16Q8N428 558 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 SSH1Q8WYL5 1049 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 PIF1Q9H611 641 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 VTA1Q9NP79 307 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 C14orf119Q9NWQ9 140 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 INTUQ9ULD6 942 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 SLC45A2Q9UMX9 530 aa3.8□□□□□ -1.8
CCDC93-209ENST00000488908 POLRMTO00411 1230 aaKnown RBP3.79□□□□□ -1.8
CCDC93-209ENST00000488908 SOCS2O14508 198 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 ZNF213O14771 459 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 BRINP1O60477 761 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 JUPP14923 745 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 ALDH9A1P49189 494 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 CDC42EP1Q00587 391 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 TARDBPQ13148 414 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC93-209ENST00000488908 KIAA1161Q6NSJ0 714 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 SMRP1Q8NCR6 262 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC93-209ENST00000488908 PRSS3P2Q8NHM4 247 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 IFI44Q8TCB0 444 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 NRG4Q8WWG1 115 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 AMBRA1Q9C0C7 1298 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 AFG3L2Q9Y4W6 797 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 GPR45Q9Y5Y3 372 aa3.79□□□□□ -1.8
CCDC93-209ENST00000488908 QSOX1O00391 747 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 ADAMTS3O15072 1205 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 SOAT2O75908 522 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 WASP42768 502 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
CCDC93-209ENST00000488908 ZNF618Q5T7W0 954 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 SLC30A10Q6XR72 485 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 MRPL10Q7Z7H8 261 aaKnown RBP3.78□□□□□ -1.8
CCDC93-209ENST00000488908 RNF180Q86T96 592 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 NANOGP1Q8N7R0 232 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 KLHDC4Q8TBB5 520 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 NSMCE1Q8WV22 266 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 RAB24Q969Q5 203 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 FAM136AQ96C01 138 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 AHCYL2Q96HN2 611 aaKnown RBP3.78□□□□□ -1.8
CCDC93-209ENST00000488908 CAMKK2Q96RR4 588 aa3.78□□□□□ -1.8
CCDC93-209ENST00000488908 SAP30BPQ9UHR5 308 aaKnown RBP3.78□□□□□ -1.8
CCDC93-209ENST00000488908 E9PLN8 166 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 H0YIZ8 118 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 EEFSECP57772 596 aaKnown RBP3.77□□□□□ -1.81
CCDC93-209ENST00000488908 LRRC41Q15345 812 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 TAF7LQ5H9L4 462 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 RBM20Q5T481 1227 aaKnown RBP3.77□□□□□ -1.81
CCDC93-209ENST00000488908 MIS18BP1Q6P0N0 1132 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 WDR53Q7Z5U6 358 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms