RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 B4GALT5O43286 388 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 GPR32O75388 356 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CD4P01730 458 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CTNNA2P26232 953 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 RFC5P40937 340 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 PTGIRP43119 386 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 EPC2Q52LR7 807 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 SEL1L2Q5TEA6 688 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CACNA2D3Q8IZS8 1091 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 PSPC1Q8WXF1 523 aaKnown RBP19.47■□□□□ 0.71
COL16A1-215ENST00000488897 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-215ENST00000488897 PGM2Q96G03 612 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 WNT8AQ9H1J5 351 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CDY2AQ9Y6F7 541 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 MAPK13O15264 365 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CAND2O75155 1236 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 MTA2O94776 668 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 CKBP12277 381 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 GZMAP12544 262 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 DLG4P78352 724 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 MBTPS1Q14703 1052 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 KCTD19Q17RG1 926 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-215ENST00000488897 ZDHHC24Q6UX98 284 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 RUNDC3BQ96NL0 473 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 EPB41L4BQ9H329 900 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 PCIF1Q9H4Z3 704 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 MTRF1LQ9UGC7 380 aaKnown RBP19.47■□□□□ 0.71
COL16A1-215ENST00000488897 TET1Q8NFU7 2136 aa19.47■□□□□ 0.71
COL16A1-215ENST00000488897 GNAT1P11488 350 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 GPC3P51654 580 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 SMTNP53814 917 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 PPP3CAQ08209 521 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 ERMARDQ5T6L9 678 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 GKAP1Q5VSY0 366 aaPredicted RBP19.46■□□□□ 0.71
COL16A1-215ENST00000488897 TAS1R3Q7RTX0 852 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 CPLX4Q7Z7G2 160 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 C7orf61Q8IZ16 206 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 PRELID2Q8N945 189 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 FBXO25Q8TCJ0 367 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 TATDN2Q93075 761 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 GOLGA6L7A0A1B0GV03 622 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 PMM2O15305 246 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 MAGEB2O15479 319 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 GHRP10912 638 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 PLS3P13797 630 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 SNRPFP62306 86 aaKnown RBP19.46■□□□□ 0.71
COL16A1-215ENST00000488897 QPCTQ16769 361 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 TRIM71Q2Q1W2 868 aaKnown RBP19.46■□□□□ 0.71
COL16A1-215ENST00000488897 DEFB128Q7Z7B8 93 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 XXYLT1Q8NBI6 393 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 MCPH1Q8NEM0 835 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 P3H4Q92791 437 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 C18orf8Q96DM3 657 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 KMT5AQ9NQR1 393 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 RNF19AQ9NV58 838 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
COL16A1-215ENST00000488897 COL1A2P08123 1366 aa19.46■□□□□ 0.71
COL16A1-215ENST00000488897 SMIM35A0A1B0GVV1 85 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 INO80B-WBP1J3KQ70 363 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 GCLMP48507 274 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 PEX5P50542 639 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 MNAT1P51948 309 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 IER5Q5VY09 327 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 SESTD1Q86VW0 696 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 CCDC13Q8IYE1 715 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 ANKLE1Q8NAG6 615 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 KRT35Q92764 455 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 CPB2Q96IY4 423 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 XPO6Q96QU8 1125 aaKnown RBP19.45■□□□□ 0.7
COL16A1-215ENST00000488897 INO80BQ9C086 356 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-215ENST00000488897 ADAMTS10Q9H324 1103 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 AGO3Q9H9G7 860 aaKnown RBP19.45■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM39AQ9NV64 488 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 EYSQ5T1H1 3165 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 SCN5AQ14524 2016 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM110-MUSTN1A8MSY1 372 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 COMTP21964 271 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 NFX1Q12986 1120 aaKnown RBP19.45■□□□□ 0.7
COL16A1-215ENST00000488897 C6orf118Q5T5N4 469 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 ZSWIM2Q8NEG5 633 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 CHMP6Q96FZ7 201 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 GRHL1Q9NZI5 618 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 MTUS1Q9ULD2 1270 aa19.45■□□□□ 0.7
COL16A1-215ENST00000488897 DENND3A2RUS2 1198 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 SHBGP04278 402 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 PPARDQ03181 441 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 ADCY2Q08462 1091 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 MESDQ14696 234 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 GPNMBQ14956 572 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 TCTN1Q2MV58 587 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 SEZ6Q53EL9 994 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 AADACL2Q6P093 401 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 CCDC137Q6PK04 289 aaKnown RBP19.44■□□□□ 0.7
COL16A1-215ENST00000488897 HAUS6Q7Z4H7 955 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 DPF3Q92784 378 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 RNF25Q96BH1 459 aaPredicted RBP19.44■□□□□ 0.7
COL16A1-215ENST00000488897 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
COL16A1-215ENST00000488897 FAM129AQ9BZQ8 928 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 HIPK3Q9H422 1215 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms