RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TCF20Q9UGU0 1960 aaKnown RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 LRRIQ3A6PVS8 624 aaPredicted RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 CCL16O15467 120 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 ALADP13716 330 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 ALDH1A3P47895 512 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 CASP4P49662 377 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 MCCD1P59942 119 aaPredicted RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 CAMK4Q16566 473 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 ISM2Q6H9L7 571 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 CENPPQ6IPU0 288 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 PDCL2Q8N4E4 241 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 C2orf15Q8WU43 125 aaKnown RBP13.84□□□□□ -0.19
PHF1-210ENST00000488767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.19
PHF1-210ENST00000488767 INSL5Q9Y5Q6 135 aa13.84□□□□□ -0.19
PHF1-210ENST00000488767 PLXNA3P51805 1871 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 BIN1O00499 593 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 AKAP3O75969 853 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 FSHRP23945 695 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 CCNE1P24864 410 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 TUFMP49411 452 aaKnown RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 EPHB3P54753 998 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 CLDN10P78369 228 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 NCOA4Q13772 614 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 NFE2Q16621 373 aaPredicted RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 PABPC1LQ4VXU2 614 aaKnown RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 SLC39A12Q504Y0 691 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 RNF19BQ6ZMZ0 732 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 BORCS6Q96GS4 357 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 ZNF512Q96ME7 567 aaPredicted RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 PGLYRP2Q96PD5 576 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 ACBD6Q9BR61 282 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 DNAI2Q9GZS0 605 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 ZCWPW1Q9H0M4 648 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 SNX25Q9H3E2 840 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
PHF1-210ENST00000488767 KIAA1468Q9P260 1216 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 NCOR1O75376 2440 aa13.83□□□□□ -0.2
PHF1-210ENST00000488767 PAPLNO95428 1278 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 FGFR1OPO95684 399 aaKnown RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 STAU1O95793 577 aaKnown RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 PTPN2P17706 415 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 GTF2H1P32780 548 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 PIK3CAP42336 1068 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 MORC3Q14149 939 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 VEPH1Q14D04 833 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 MAPRE1Q15691 268 aaKnown RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 SGSM1Q2NKQ1 1148 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 ZNF667Q5HYK9 610 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 CYP4A22Q5TCH4 519 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 TCERG1LQ5VWI1 586 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 TDRD10Q5VZ19 366 aaKnown RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 ANKRD40Q6AI12 368 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 GET4Q7L5D6 327 aaPredicted RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 GRASPQ7Z6J2 395 aaPredicted RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 LEMD2Q8NC56 503 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 TAF4BQ92750 862 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 FAM84AQ96KN4 292 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 CLSTN2Q9H4D0 955 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
PHF1-210ENST00000488767 ZFP37Q9Y6Q3 630 aaPredicted RBP13.82□□□□□ -0.2
PHF1-210ENST00000488767 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ZNF197O14709 1029 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 DCXO43602 365 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 CST3P01034 146 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 FAM163BP0C2L3 166 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 MYL6P60660 151 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 TWF1Q12792 350 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 DUSP4Q13115 394 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 PAK1Q13153 545 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 TAF12Q16514 161 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ZACNQ401N2 412 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 PDZD4Q76G19 769 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 ITIH5Q86UX2 942 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ZDHHC14Q8IZN3 488 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 OR10T2Q8NGX3 314 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 FAM200AQ8TCP9 573 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms