RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 HPDLQ96IR7 371 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 KCNK12Q9HB15 430 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 CEP72Q9P209 647 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 SCN1AP35498 2009 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 MTCL1Q9Y4B5 1905 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 PRR33A8MZF0 331 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 GABRDO14764 452 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 KIF20AO95235 890 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 LRG1P02750 347 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 TWF1Q12792 350 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 SLC5A9Q2M3M2 681 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 PABPC1LQ4VXU2 614 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 GET4Q7L5D6 327 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 OSTM1Q86WC4 334 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 TOP6BLQ8N6T0 577 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 FGF13Q92913 245 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 SORCS3Q9UPU3 1222 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 SLC27A5Q9Y2P5 690 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 YIPF1Q9Y548 306 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
CTDSP1-209ENST00000488627 TRIOO75962 3097 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 ANHXE9PGG2 379 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 CALUO43852 315 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 HUS1O60921 280 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 PTPN2P17706 415 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 DLG4P78352 724 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 PRSS36Q5K4E3 855 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 C1orf220Q5T0J3 134 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 DPH6Q7L8W6 267 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 SPATA18Q8TC71 538 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 ASIC4Q96FT7 647 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 XYLT2Q9H1B5 865 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 TMLHEQ9NVH6 421 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 IGSF9Q9P2J2 1179 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 HSFX1Q9UBD0 423 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 CDH7Q9ULB5 785 aa17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-209ENST00000488627 TECTAO75443 2155 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 C2orf16Q68DN1 1984 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 MAPK13O15264 365 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 AKAP3O75969 853 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 CCR2P41597 374 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 PRCPP42785 496 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 CDR1P51861 262 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 EPHA5P54756 1037 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 SIGLEC14Q08ET2 396 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 NPAS3Q8IXF0 933 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 UBALD2Q8IYN6 164 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 HS6ST3Q8IZP7 471 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 LRRC3Q9BY71 257 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 DENND4AQ7Z401 1863 aa17.13■□□□□ 0.33
CTDSP1-209ENST00000488627 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 M0R296 226 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 HCRTO43612 131 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 MOSPD3O75425 235 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 SOAT2O75908 522 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 NR2F2P24468 414 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 AP3M2P53677 418 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 MYL6P60660 151 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 SMARCB1Q12824 385 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 TDGQ13569 410 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 HTR4Q13639 388 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 BMP8AQ7Z5Y6 402 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 SLC44A3Q8N4M1 653 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 TCEAL4Q96EI5 215 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 ZNF512Q96ME7 567 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 RPP25Q9BUL9 199 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 RMND1Q9NWS8 449 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms