RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GPR158Q5T848 1215 aa20.67■□□□□ 0.9
GGPS1-206ENST00000488594 TXNDC11Q6PKC3 985 aa20.67■□□□□ 0.9
GGPS1-206ENST00000488594 DDX1Q92499 740 aaKnown RBP20.67■□□□□ 0.9
GGPS1-206ENST00000488594 TASP1Q9H6P5 420 aa20.67■□□□□ 0.9
GGPS1-206ENST00000488594 GTSE1Q9NYZ3 720 aa20.67■□□□□ 0.9
GGPS1-206ENST00000488594 ZMYM5Q9UJ78 669 aa20.67■□□□□ 0.9
GGPS1-206ENST00000488594 FAM189A1O60320 539 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 PIGRP01833 764 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 CCINQ13939 588 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 PTPAQ15257 358 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 PPM1JQ5JR12 505 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 TMEM130Q8N3G9 435 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 BPIFB1Q8TDL5 484 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 SENP8Q96LD8 212 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 LRRC3BQ96PB8 259 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 GCNAQ96QF7 691 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 THG1LQ9NWX6 298 aaKnown RBP20.66■□□□□ 0.9
GGPS1-206ENST00000488594 DSEQ9UL01 958 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 TBX20Q9UMR3 447 aa20.66■□□□□ 0.9
GGPS1-206ENST00000488594 SLC26A4O43511 780 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 SEC24BO95487 1268 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 CDC25CP30307 473 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 ABCD1P33897 745 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 SRSF5Q13243 272 aaKnown RBP20.65■□□□□ 0.9
GGPS1-206ENST00000488594 TMEM119Q4V9L6 283 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 WDR44Q5JSH3 913 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 ARL6IP4Q66PJ3 421 aaKnown RBP20.65■□□□□ 0.9
GGPS1-206ENST00000488594 HEATR6Q6AI08 1181 aaKnown RBP20.65■□□□□ 0.9
GGPS1-206ENST00000488594 CEP68Q76N32 757 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 WDR5BQ86VZ2 330 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 TTC9BQ8N6N2 239 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 ZFYVE19Q96K21 471 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 PLIN2Q99541 437 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 DERAQ9Y315 318 aa20.65■□□□□ 0.9
GGPS1-206ENST00000488594 A0A0B4J269 797 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 NPHP3-ACAD11A0A0J9YXS1 232 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 VWA3AA6NCI4 1184 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 CYP11A1P05108 521 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 MCM2P49736 904 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 CACNB1Q02641 598 aaPredicted RBP20.64■□□□□ 0.89
GGPS1-206ENST00000488594 SMARCB1Q12824 385 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 PON2Q15165 354 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 ITPRIPL2Q3MIP1 535 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 ARSHQ5FYA8 562 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 C9orf57Q5W0N0 161 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 GPIHBP1Q8IV16 184 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 FAM160A2Q8N612 972 aaPredicted RBP20.64■□□□□ 0.89
GGPS1-206ENST00000488594 TTC8Q8TAM2 541 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 C2orf15Q8WU43 125 aaKnown RBP20.64■□□□□ 0.89
GGPS1-206ENST00000488594 TMEM209Q96SK2 561 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 SEPT5Q99719 369 aaPredicted RBP20.64■□□□□ 0.89
GGPS1-206ENST00000488594 MSTO1Q9BUK6 570 aa20.64■□□□□ 0.89
GGPS1-206ENST00000488594 PIRO00625 290 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 PPEF2O14830 753 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 SOAT2O75908 522 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 KRT37O76014 449 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 MGAT5BQ3V5L5 792 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 MCTP1Q6DN14 999 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 JADE1Q6IE81 842 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 METTL23Q86XA0 190 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 OR10T2Q8NGX3 314 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 FAM212AQ96EL1 285 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 AK8Q96MA6 479 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 REEP2Q9BRK0 252 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 ZCWPW1Q9H0M4 648 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 PPP4R2Q9NY27 417 aa20.63■□□□□ 0.89
GGPS1-206ENST00000488594 CPSF3Q9UKF6 684 aaKnown RBP20.63■□□□□ 0.89
GGPS1-206ENST00000488594 CCDC163A0A0D9SF12 145 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 K7ENM7 598 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 PRAMEF12O95522 483 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 ZNF131P52739 623 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 TNK2Q07912 1038 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 TMEM132DQ14C87 1099 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 TAF12Q16514 161 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 SLC39A12Q504Y0 691 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 THEM5Q8N1Q8 247 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 MYCT1Q8N699 235 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 LOXL4Q96JB6 756 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 ASB7Q9H672 318 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 PARVGQ9HBI0 331 aa20.62■□□□□ 0.89
GGPS1-206ENST00000488594 ANO9A1A5B4 782 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 ATG13O75143 517 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 FAM13AO94988 1023 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 NFICP08651 508 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 ATF6P18850 670 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 CYP4F8P98187 520 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 SPPL2BQ8TCT7 592 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 IL21Q9HBE4 155 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 C2orf42Q9NWW7 574 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 C2CD2Q9Y426 696 aa20.61■□□□□ 0.89
GGPS1-206ENST00000488594 TRAK2O60296 914 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 LIMK1P53667 647 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 GRSF1Q12849 480 aaKnown RBP eCLIP20.6■□□□□ 0.89
GGPS1-206ENST00000488594 IL31Q6EBC2 164 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 GPBP1Q86WP2 473 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 CMTM8Q8IZV2 173 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 GAB3Q8WWW8 586 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 CALML4Q96GE6 196 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms