RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 WSCD1Q658N2 575 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 ZNF852Q6ZMS4 543 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 DNAJB7Q7Z6W7 309 aaPredicted RBP26.52■■□□□ 1.84
LIME1-206ENST00000487026 LINC00301Q8NCQ3 95 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 NOC3LQ8WTT2 800 aaKnown RBP26.52■■□□□ 1.84
LIME1-206ENST00000487026 FOXD4L4Q8WXT5 416 aaPredicted RBP26.52■■□□□ 1.84
LIME1-206ENST00000487026 FAM84AQ96KN4 292 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 OSBPL6Q9BZF3 934 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 ZCWPW1Q9H0M4 648 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 PCIF1Q9H4Z3 704 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 OLFML3Q9NRN5 406 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 DSEQ9UL01 958 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 FRMD3A2A2Y4 597 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 PRPF6O94906 941 aaKnown RBP26.51■■□□□ 1.83
LIME1-206ENST00000487026 PSMC3P17980 439 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 SCARA3Q6AZY7 606 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 LRRTM3Q86VH5 581 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 DNASE1L2Q92874 299 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 RSPRY1Q96DX4 576 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 SEPT5Q99719 369 aaPredicted RBP26.51■■□□□ 1.83
LIME1-206ENST00000487026 TRPV4Q9HBA0 871 aa26.51■■□□□ 1.83
LIME1-206ENST00000487026 HEPACAM2A8MVW5 462 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 KPNA7A9QM74 516 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 GAREM2Q75VX8 874 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 THEM5Q8N1Q8 247 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 FAM200AQ8TCP9 573 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 IRF7Q92985 503 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 PSMG2Q969U7 264 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 LPIN3Q9BQK8 851 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 CBWD1Q9BRT8 395 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 TSC2P49815 1807 aa26.5■■□□□ 1.83
LIME1-206ENST00000487026 SPTLC2O15270 562 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 FZD5Q13467 585 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 MGAT5BQ3V5L5 792 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 NT5DC4Q86YG4 428 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 MFSD6LQ8IWD5 586 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 BRSK2Q8IWQ3 736 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 GLIS3Q8NEA6 775 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 HPS3Q969F9 1004 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 NELL2Q99435 816 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 GPR88Q9GZN0 384 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 ATXN3LQ9H3M9 355 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 RBAKQ9NYW8 714 aaPredicted RBP26.49■■□□□ 1.83
LIME1-206ENST00000487026 NDRG2Q9UN36 371 aaKnown RBP26.49■■□□□ 1.83
LIME1-206ENST00000487026 AGAP1Q9UPQ3 857 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 ASB3Q9Y575 518 aa26.49■■□□□ 1.83
LIME1-206ENST00000487026 LAMTOR5O43504 91 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 ITGB3P05106 788 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 GARTP22102 1010 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 POLR2BP30876 1174 aaKnown RBP26.48■■□□□ 1.83
LIME1-206ENST00000487026 TUFMP49411 452 aaKnown RBP26.48■■□□□ 1.83
LIME1-206ENST00000487026 FOXD4L6Q3SYB3 417 aaPredicted RBP26.48■■□□□ 1.83
LIME1-206ENST00000487026 SV2CQ496J9 727 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 FOXD4L3Q6VB84 417 aaPredicted RBP26.48■■□□□ 1.83
LIME1-206ENST00000487026 CCDC65Q8IXS2 484 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 GIPC2Q8TF65 315 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 CLDN23Q96B33 292 aa26.48■■□□□ 1.83
LIME1-206ENST00000487026 ZNF263O14978 683 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 LDHAP00338 332 aaKnown RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 LMNAP02545 664 aaKnown RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 ATF6P18850 670 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 GABRR2P28476 465 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 CSTF1Q05048 431 aaKnown RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 ARID3BQ8IVW6 561 aaPredicted RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 C1orf127Q8N9H9 656 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 DEPDC1BQ8WUY9 529 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 ZNF396Q96N95 335 aaPredicted RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 MKNK1Q9BUB5 465 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 PDE11AQ9HCR9 933 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 HSFX1Q9UBD0 423 aa26.47■■□□□ 1.83
LIME1-206ENST00000487026 MRPS17Q9Y2R5 130 aaKnown RBP26.47■■□□□ 1.83
LIME1-206ENST00000487026 TCHHQ07283 1943 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 NCAM2O15394 837 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 EXTL3O43909 919 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 ALCAMQ13740 583 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 E2F4Q16254 413 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 ITIH5Q86UX2 942 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 CSGALNACT2Q8N6G5 542 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 CACTINQ8WUQ7 758 aaKnown RBP26.46■■□□□ 1.83
LIME1-206ENST00000487026 ZNF560Q96MR9 790 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 SEMA4AQ9H3S1 761 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 TMEM206Q9H813 350 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 TMLHEQ9NVH6 421 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 ABI2Q9NYB9 513 aaPredicted RBP26.46■■□□□ 1.83
LIME1-206ENST00000487026 PIAS3Q9Y6X2 628 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 SPTBN4Q9H254 2564 aa26.46■■□□□ 1.83
LIME1-206ENST00000487026 F5P12259 2224 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 PPP6R2O75170 966 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 GPR158Q5T848 1215 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 LMBRD2Q68DH5 695 aaPredicted RBP26.45■■□□□ 1.82
LIME1-206ENST00000487026 YAF2Q8IY57 180 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 ZNF687Q8N1G0 1237 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 E2F7Q96AV8 911 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 DHX58Q96C10 678 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 LRRC3BQ96PB8 259 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 EP300Q09472 2414 aaPredicted RBP26.45■■□□□ 1.82
LIME1-206ENST00000487026 GVINP1Q7Z2Y8 2422 aa26.45■■□□□ 1.82
LIME1-206ENST00000487026 MAN2B1O00754 1011 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 HAPLN1P10915 354 aaPredicted RBP26.44■■□□□ 1.82
LIME1-206ENST00000487026 PNPLA4P41247 253 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms