RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CLSTN1O94985 981 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 TFRCP02786 760 aaKnown RBP12.36□□□□□ -0.43
PRKCB-207ENST00000486868 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 CD58P19256 250 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 COMTP21964 271 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 RRM1P23921 792 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 TNFRSF8P28908 595 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
PRKCB-207ENST00000486868 PEX5P50542 639 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 CLCN6P51797 869 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 ACLYP53396 1101 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 MAMLD1Q13495 774 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 ITGA7Q13683 1181 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 PTGISQ16647 500 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
PRKCB-207ENST00000486868 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
PRKCB-207ENST00000486868 ARRDC4Q8NCT1 418 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 SDCBP2Q9H190 292 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 ERVK-5Q9HDB9 667 aa12.36□□□□□ -0.43
PRKCB-207ENST00000486868 HMX1Q9NP08 348 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-207ENST00000486868 CEP104O60308 925 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 PROSCO94903 275 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 BRD2P25440 801 aaKnown RBP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 CXCR5P32302 372 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 GABRB2P47870 512 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 DSC3Q14574 896 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 MESDQ14696 234 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 SV2CQ496J9 727 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 FAM47CQ5HY64 1035 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 FBXO47Q5MNV8 452 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 LHX8Q68G74 356 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 TMCO3Q6UWJ1 677 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 LCLAT1Q6UWP7 414 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 FEZF2Q8TBJ5 459 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 FNIP1Q8TF40 1166 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 TFAP2BQ92481 460 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 SLITRK6Q9H5Y7 841 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 SMYD3Q9H7B4 428 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 FAM105AQ9NUU6 356 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 PARP2Q9UGN5 583 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 IP6K2Q9UHH9 426 aa12.35□□□□□ -0.43
PRKCB-207ENST00000486868 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRKCB-207ENST00000486868 ANK1P16157 1881 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 TMEM191CA6NGB0 347 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 O00370 1275 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 INPPL1O15357 1258 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 SPOPO43791 374 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 INHAP05111 366 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 ITGA4P13612 1032 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 GRK4P32298 578 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 RPL9P32969 192 aaKnown RBP12.34□□□□□ -0.43
PRKCB-207ENST00000486868 TAF6P49848 677 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 CDH8P55286 799 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 RWDD2BP57060 319 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 SNX16P57768 344 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 ACAP1Q15027 740 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 CC2D1AQ6P1N0 951 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-207ENST00000486868 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 TOP6BLQ8N6T0 577 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 NIPA2Q8N8Q9 360 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-207ENST00000486868 STK32AQ8WU08 396 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 MAIP1Q8WWC4 291 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 GOLPH3Q9H4A6 298 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRKCB-207ENST00000486868 ANAPC7Q9UJX3 599 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRKCB-207ENST00000486868 MYH10P35580 1976 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
PRKCB-207ENST00000486868 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.43
PRKCB-207ENST00000486868 A0A0U1RQF3 1178 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 SIGLEC16A6NMB1 481 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms