RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 C1orf186Q6ZWK4 172 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 ULK2Q8IYT8 1036 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 OR6Y1Q8NGX8 325 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 KREMEN1Q96MU8 473 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 EIF2AK1Q9BQI3 630 aaKnown RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 RTFDC1Q9BY42 306 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 PCIF1Q9H4Z3 704 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 CIDEBQ9UHD4 219 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 A0A0J9YVX5 310 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 SMIM31A0A1B0GVY4 71 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 ALOX15BO15296 676 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 CIB2O75838 187 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 TGDSO95455 350 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 SLC1A1P43005 524 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 BTDP43251 543 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 GEMIN4P57678 1058 aaKnown RBP11.21□□□□□ -0.62
CCDC171-208ENST00000486641 GPX6P59796 221 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 HPCAP84074 193 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 ARHGAP4P98171 946 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.62
CCDC171-208ENST00000486641 PRKD1Q15139 912 aaPredicted RBP11.21□□□□□ -0.62
CCDC171-208ENST00000486641 C6orf163Q5TEZ5 329 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 ACAD10Q6JQN1 1059 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 KCTD1Q719H9 257 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 BANPQ8N9N5 519 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 LENG9Q96B70 501 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 DGCR14Q96DF8 476 aaKnown RBP11.21□□□□□ -0.62
CCDC171-208ENST00000486641 PARVGQ9HBI0 331 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.62
CCDC171-208ENST00000486641 CAPN14A8MX76 684 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 VILLO15195 856 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 TM9SF1O15321 606 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 UQCRBP14927 111 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CYP11B1P15538 503 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CETN1Q12798 172 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 MSLNQ13421 630 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 LPCAT4Q643R3 524 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 RNF111Q6ZNA4 994 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 FAM178BQ8IXR5 827 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 SHKBP1Q8TBC3 707 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CRYGNQ8WXF5 182 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 LZICQ8WZA0 190 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CDK5RAP2Q96SN8 1893 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 RAD21O60216 631 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 PGM3O95394 542 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 CALCAP01258 141 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 AKR1B1P15121 316 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 VCLP18206 1134 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 BGNP21810 368 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 VAMP7P51809 220 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 KDSRQ06136 332 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ASPHQ12797 758 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 DLG1Q12959 904 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 Q4G0T1 1027 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 C1orf220Q5T0J3 134 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 LLGL2Q6P1M3 1020 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 TRIM42Q8IWZ5 723 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 PPM1KQ8N3J5 372 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 MZB1Q8WU39 189 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ANKRD2Q9GZV1 360 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 GPAMQ9HCL2 828 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 VAV3Q9UKW4 847 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ZNF232Q9UNY5 417 aa11.2□□□□□ -0.62
CCDC171-208ENST00000486641 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
CCDC171-208ENST00000486641 MYH11P35749 1972 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TISP43B9A030 160 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 E5RJQ4 531 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 MEIS2O14770 477 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TBX3O15119 743 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 MSH4O15457 936 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 LDHCP07864 332 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 GYS1P13807 737 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 RGS2P41220 211 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 AQP4P55087 323 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 GPS1Q13098 491 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 HSF5Q4G112 596 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TMEM259Q4ZIN3 620 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms