RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PNPLA1Q8N8W4 532 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 LSM14AQ8ND56 463 aaKnown RBP9.12□□□□□ -0.95
XRN1-212ENST00000486211 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 TMEM87BQ96K49 555 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 CAMK1GQ96NX5 476 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 ZMYND12Q9H0C1 365 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 HPS4Q9NQG7 708 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 FSCN3Q9NQT6 498 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 SLC12A7Q9Y666 1083 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 PTPRDP23468 1912 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 MYO16Q9Y6X6 1858 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 ARID2Q68CP9 1835 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 TNFRSF10BO14763 440 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 RECQL4O94761 1208 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 B3GAT3O94766 335 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 RFC5P40937 340 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 PTGER3P43115 390 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 SH3BP2P78314 561 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 POU5F1BQ06416 359 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 NCBP1Q09161 790 aaKnown RBP9.11□□□□□ -0.95
XRN1-212ENST00000486211 EMC2Q15006 297 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 TRIP6Q15654 476 aaKnown RBP9.11□□□□□ -0.95
XRN1-212ENST00000486211 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
XRN1-212ENST00000486211 TPGS2Q68CL5 300 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 NAIF1Q69YI7 327 aaPredicted RBP9.11□□□□□ -0.95
XRN1-212ENST00000486211 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 SYT12Q8IV01 421 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 REXO1Q8N1G1 1221 aaKnown RBP9.11□□□□□ -0.95
XRN1-212ENST00000486211 RPLP0P6Q8NHW5 317 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 BPIFB1Q8TDL5 484 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 CCDC136Q96JN2 1154 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 FAM83CQ9BQN1 747 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 TPSD1Q9BZJ3 242 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 DNAJC25Q9H1X3 360 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 PRORYQ9H606 182 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 CLMPQ9H6B4 373 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 XPNPEP1Q9NQW7 623 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
XRN1-212ENST00000486211 PI4KAP42356 2102 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 EML1O00423 815 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 OPHN1O60890 802 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 VNN2O95498 520 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 DRD1P21728 446 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 WEE1P30291 646 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 ABCG1P45844 678 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 MCM2P49736 904 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 CLCNKBP51801 687 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 ARPP19P56211 112 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 CAPSQ13938 189 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 MRPL58Q14197 206 aaKnown RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 UPP1Q16831 310 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 PTPRNQ16849 979 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 GAREM2Q75VX8 874 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 SLCO6A1Q86UG4 719 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 EXOC8Q8IYI6 725 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 HDDC3Q8N4P3 179 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 OR2I1PQ8NGU4 316 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 OLIG1Q8TAK6 271 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 TCP11Q8WWU5 503 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 CNOT6LQ96LI5 555 aaKnown RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 PPP1R10Q96QC0 940 aaKnown RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 FNBP1Q96RU3 617 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 POLR3CQ9BUI4 534 aaPredicted RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 NFKBIZQ9BYH8 718 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 CAPN10Q9HC96 672 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 AFF4Q9UHB7 1163 aaKnown RBP9.1□□□□□ -0.95
XRN1-212ENST00000486211 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 PILRBQ9UKJ0 227 aa9.1□□□□□ -0.95
XRN1-212ENST00000486211 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 TBX3O15119 743 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 SH3BP5O60239 455 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 GJB3O75712 270 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 U2AF2P26368 475 aaKnown RBP eCLIP9.09□□□□□ -0.95
XRN1-212ENST00000486211 MCM5P33992 734 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 QARSP47897 775 aaKnown RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 GALK1P51570 392 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 CYP4F3Q08477 520 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 RUNX3Q13761 415 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MXD4Q14582 209 aaPredicted RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 PTPAQ15257 358 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MAPK6Q16659 721 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 PFKFB3Q16875 520 aaPredicted RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 Q4G0T1 1027 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 FBXO43Q4G163 708 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 APOA5Q6Q788 366 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 TOGARAM2Q6ZUX3 1019 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 ARMCX6Q7L4S7 300 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 TMPRSS7Q7RTY8 843 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MARCH9Q86YJ5 346 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MINDY1Q8N5J2 469 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MDGA1Q8NFP4 955 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms