RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DNAJB7Q7Z6W7 309 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 ZNF605Q86T29 641 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 NLRP10Q86W26 655 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 CXorf67Q86X51 503 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 ZNF619Q8N2I2 560 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 LRRC71Q8N4P6 559 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 CAMKK1Q8N5S9 505 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 ESX1Q8N693 406 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 TMCO5AQ8N6Q1 288 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 ZNF540Q8NDQ6 660 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 TGFBRAP1Q8WUH2 860 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 AUTS2Q8WXX7 1259 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 DHTKD1Q96HY7 919 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 EPSTI1Q96J88 318 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 VPS39Q96JC1 886 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 PIGSQ96S52 555 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 SLF1Q9BQI6 1058 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 MMTAG2Q9BU76 263 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 EDEM3Q9BZQ6 932 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 TRIM5Q9C035 493 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 NACA2Q9H009 215 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 VEZTQ9HBM0 779 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 UBN1Q9NPG3 1134 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 AP5S1Q9NUS5 200 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 UBAP1Q9NZ09 502 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 CWC15Q9P013 229 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 AASSQ9UDR5 926 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 TUBD1Q9UJT1 453 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 FBXL7Q9UJT9 491 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 PADI4Q9UM07 663 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 YBX2Q9Y2T7 364 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 CAB39Q9Y376 341 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 SLC30A1Q9Y6M5 507 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 CAPN8A6NHC0 703 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CCDC169A6NNP5 214 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SGK1O00141 431 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SCDO00767 359 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SLC7A4O43246 635 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MGEA5O60502 916 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PALMO75781 387 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 FGFR1OPO95684 399 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 PLATP00750 562 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 GZMAP12544 262 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SYN1P17600 705 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MSH2P43246 934 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CENPAP49450 140 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SULT1E1P49888 294 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 EPHA5P54756 1037 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 DRG2P55039 364 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 MANFP55145 182 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 RNASE9P60153 205 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 ICA1Q05084 483 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 BLMHQ13867 455 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PRKG1Q13976 671 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PPA1Q15181 289 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 INAQ16352 499 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 ZSCAN26Q16670 478 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 WSCD2Q2TBF2 565 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MMEL1Q495T6 779 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CAVIN4Q5BKX8 364 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 FKBP15Q5T1M5 1219 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MBNL2Q5VZF2 373 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 FAM205BPQ63HN1 556 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 RAB12Q6IQ22 244 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 NPNTQ6UXI9 565 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PLEKHM3Q6ZWE6 761 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PHYKPLQ8IUZ5 450 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PEX5LQ8IYB4 626 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CCDC170Q8IYT3 715 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 OR2C3Q8N628 320 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 NAT16Q8N8M0 369 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 AVL9Q8NBF6 648 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SPC24Q8NBT2 197 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 ANKRD20A12PQ8NF67 263 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CTCFLQ8NI51 663 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 ADAMTS18Q8TE60 1221 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 SH3RF2Q8TEC5 729 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 DENND1AQ8TEH3 1009 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 NOC3LQ8WTT2 800 aaKnown RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 STON2Q8WXE9 905 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 ZNF845Q96IR2 970 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 C1orf74Q96LT6 269 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 TBCBQ99426 244 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 NAP1L3Q99457 506 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 PI4K2AQ9BTU6 479 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 CDADC1Q9BWV3 514 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MCOLN1Q9GZU1 580 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 BTBD1Q9H0C5 482 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 BHMT2Q9H2M3 363 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 MS4A5Q9H3V2 200 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 ZNF552Q9H707 407 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 TRPV4Q9HBA0 871 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 VPS45Q9NRW7 570 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 PSD3Q9NYI0 1048 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.621e-9■■■■■ 34.3
RTN4-213ENST00000485749 DSEQ9UL01 958 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 BARX2Q9UMQ3 279 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 JAG2Q9Y219 1238 aa4.91□□□□□ -1.62
RTN4-213ENST00000485749 COA3Q9Y2R0 106 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms