RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 CLDN3O15551 220 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 TGM5O43548 720 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 RFPL2O75678 378 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 VSNL1P62760 191 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 SOX4Q06945 474 aaPredicted RBP11.55□□□□□ -0.56
DDX56-212ENST00000485367 PSMD5Q16401 504 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 PTPN21Q16825 1174 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 TUBB8Q3ZCM7 444 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 TRIM67Q6ZTA4 783 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 APTXQ7Z2E3 356 aaKnown RBP11.55□□□□□ -0.56
DDX56-212ENST00000485367 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
DDX56-212ENST00000485367 PIK3R5Q8WYR1 880 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
DDX56-212ENST00000485367 RUBCNQ92622 972 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 SNX27Q96L92 541 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
DDX56-212ENST00000485367 SLC38A7Q9NVC3 462 aa11.55□□□□□ -0.56
DDX56-212ENST00000485367 TMEM221A6NGB7 291 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 I3L4J1 428 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 M0R296 226 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 KCNE1P15382 129 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 LIG4P49917 911 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 ZNF131P52739 623 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 UPP1Q16831 310 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 CDKAL1Q5VV42 579 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 CCDC149Q6ZUS6 474 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 KREMEN2Q8NCW0 462 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 LNX1Q8TBB1 728 aaPredicted RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 DDX27Q96GQ7 796 aaKnown RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PLEKHA4Q9H4M7 779 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 FAM204AQ9H8W3 233 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 TBX20Q9UMR3 447 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 DENND4AQ7Z401 1863 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 TMEM189-UBE2V1I3L0A0 370 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PODXLO00592 558 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 MEFVO15553 781 aaPredicted RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 ADAM12O43184 909 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 C1RP00736 705 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 FGFR3P22607 806 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 USP8P40818 1118 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 BRCC3P46736 316 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 AMPD2Q01433 879 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 MCL1Q07820 350 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 MTF1Q14872 753 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PDXDC1Q6P996 788 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 LILRA6Q6PI73 481 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 CD300LGQ6UXG3 332 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 OTOP3Q7RTS5 596 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 TADA2BQ86TJ2 420 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 SMG7Q92540 1137 aaKnown RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 ACSF2Q96CM8 615 aaPredicted RBP11.54□□□□□ -0.56
DDX56-212ENST00000485367 HAPLN2Q9GZV7 340 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 USTQ9Y2C2 406 aa11.54□□□□□ -0.56
DDX56-212ENST00000485367 PDCD11Q14690 1871 aaKnown RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 RNF40O75150 1001 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 PRPF6O94906 941 aaKnown RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 ASGR2P07307 311 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 CLTAP09496 248 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 CXCL8P10145 99 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 SCP2P22307 547 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 CKAP4Q07065 602 aaKnown RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 SPAG1Q07617 926 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 DYMQ7RTS9 669 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 ZNF707Q96C28 371 aaPredicted RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 MFSD14AQ96MC6 490 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
DDX56-212ENST00000485367 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
DDX56-212ENST00000485367 ATXN2Q99700 1313 aaKnown RBP11.52□□□□□ -0.56
DDX56-212ENST00000485367 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
DDX56-212ENST00000485367 ZMYND10O75800 440 aa11.52□□□□□ -0.57
DDX56-212ENST00000485367 RHOXF2BP0C7M4 288 aa11.52□□□□□ -0.57
DDX56-212ENST00000485367 TKTP29401 623 aaKnown RBP11.52□□□□□ -0.57
DDX56-212ENST00000485367 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.57
DDX56-212ENST00000485367 OR1D2P34982 312 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms